Brachypodium distachyon (stiff brome): 100826253
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Entry
100826253 CDS
T01717
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bdi01002
]
100826253
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100826253
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100826253
Peptidases and inhibitors [BR:
bdi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100826253
Ubiquitin system [BR:
bdi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100826253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
100826253
NCBI-ProteinID:
XP_003572898
UniProt:
A0A0Q3QHQ3
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All DBs
Position
3:54357429..54363335
Genome browser
AA seq
1051 aa
AA seq
DB search
MGEATAPEGLAHRRIEFHAAIRPHATALQAVRGFRPERLCPDPDERASAAAAARSEKWET
GEPSGFGRELTAARIYLRRIGAGLQNLGNTCYLNSVLQCLTYTEPFVAYLQSGKHKSSCR
TAGFCALCALQNHVRCALQSTGKILTPMQFVKNLRCISRSFRNYRQEDAHELMVNLLESM
HKCCLPSGMPSQSPSAYEKSLVHRIFGGRLRSQVKCVSCSHCSSKFDPFLDLSLEIANAA
TLVKALQNFTEEELLDDGEKQYNCQHCRQKVAAKKRFTIDKAPDVLTIHLKRFSPFNPRH
KIDKKVDFQPTLDLKPFVSNSEDMDFRYNLYGVLVHAGWNTQAGHYYCFVRTSSGMWHNL
DDNQVHQVREADVLRQKAYMLFYVRDRVRSSVIFKDNGAANYYKKNPIPEKITCMNGTNR
NSLMETTLNVSPFINGDVKSQKQNSDNDHSSIFGSSSRGQCSKNPSNIEVIEAATIQNND
MVSVQQAPSLHPVGAATLSIQTNKTTSDSQTETMSPAQPDAIVLHDSSFDQKEHEKLLEE
KQLESNGAVSESGKDITAALPICNGGDGLLGENCQASESQNPYGEPILGTSKAVASPQMV
ETKDTGLSNETLSIREDLICCNETKESAESAKQHGQVVTAKELSVEKTAPIESTVEQTPV
QSSKSEVGQAMMKELYLKYTDHIANAEEPASVRNNELEIVQVNSEKQMCFEDSVQLICSE
VSAQPICSEVSAQPICSEVSAQPICSEVSAQPICSEVSAQLICSEVSAQAICSEVSAQVI
CSGDSAPVLDKDPGLGNLHGMMDFKSKKHVKFSVAPLLFGSKRMLLVALKLPKKRKYKRS
KRRSTFFMDHQSIADDQQTSTSETGLAKDISCKSHRRKHSRASASLDTGDQMLNKNQHLA
GDSSSAADLPMGRKDYKDAALASAELPHSCPSLVADPTDSINCADANKRIPRHFDLLTRG
LSEITVPRWVDIDMPYTKTTEFQHMRTNSIGYVLDQWDEEYDHGRRKKVRRKSKDEYGGP
NHFQEITDMRSRQGKRLKSGQTRPGNQPLRI
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaggcgacggcgccggaggggttggcgcatcggaggatagagttccacgccgcg
ataaggccgcatgcgacggcgctgcaggcggtaagggggtttcggccggagaggctgtgc
ccggaccctgatgagcgcgcgtctgcggcggcggcggcgcggagtgagaagtgggagacg
ggggagccgagcgggttcggtcgggagcttaccgccgcgaggatctacttgcggagaatc
ggggctggcttgcaaaatctcggcaatacgtgctatcttaactccgttctgcaatgcttg
acgtataccgagccattcgtggcctatctgcagagcgggaagcacaagtcctcatgtcgg
acagccggattctgtgcattatgtgctcttcaaaaccatgttagatgtgctctacagtcg
actgggaagatattgacaccaatgcagttcgtgaagaacttaagatgtatttcacgtagt
tttcgaaactataggcaagaagatgcacatgagctaatggttaacttacttgagtccatg
cacaaatgctgtttaccttctggcatgccaagtcagtctccaagtgcttatgagaagagt
ctagttcacagaatatttggtggccgcttaagaagtcaggtgaaatgcgtaagttgctcg
cactgttccagcaaatttgatcctttcctggatctcagtcttgaaattgccaatgctgct
actttggtgaaagcacttcaaaattttactgaagaagagttattagatgatggggaaaaa
cagtacaactgccagcactgcaggcaaaaagttgcggccaagaaaaggtttacaattgat
aaggctcctgacgtgttgacaattcatctgaaacgctttagtcctttcaaccctcgtcac
aagattgacaaaaaagtcgattttcagccaactttggacttaaagccatttgtcagcaat
tctgaagatatggatttcagatacaacctttatggtgtgttggttcatgctggctggaac
acacaggcaggtcattattattgctttgttcggacttctagtgggatgtggcacaatctg
gatgataaccaggttcaccaagttcgtgaggcagatgtcctaaggcagaaagcctatatg
ttattctatgtgcgtgacagagtgaggagctcagtgatttttaaagataatggtgctgct
aattattacaaaaagaaccctattcctgagaagatcacatgtatgaatggcacaaatcga
aatagtttaatggaaacaacattgaacgtttccccatttatcaatggagatgtgaagtcg
cagaagcagaactctgataatgatcactctagcattttcggcagcagctcacgaggccaa
tgttcaaaaaatcctagcaacattgaagtaattgaggctgcaactattcaaaacaatgac
atggtttcagtgcagcaagctcctagcttacatccagtcggtgctgctaccttgtccatc
caaacaaataaaacaacttcagatagtcaaacagagacaatgtccccagcacagcctgat
gctattgttcttcatgattcaagttttgatcagaaggaacatgagaagctattagaagaa
aagcaactagaatctaatggtgcagttagtgaatcaggaaaagatattactgctgccttg
cctatatgcaatggtggtgatggattgttgggagaaaattgccaggcttctgaatcacaa
aatccatacggcgaaccaattcttggtacaagtaaggcagtggcaagtccacaaatggtg
gaaaccaaggatactggtctctctaatgaaacattgtccattagagaagatttaatctgc
tgtaatgaaactaaggagtcagcagagtctgcgaagcagcatggtcaagttgttacggcg
aaggaactttcggtggaaaagactgcacctatagaaagtacagtggagcagacaccagtg
cagtccagtaaatcagaagttggacaggctatgatgaaggagctttatttgaagtacact
gaccatatagcaaatgcagaggagccggcttctgttcggaacaatgaattggagattgtg
caggtcaactctgagaagcaaatgtgctttgaagattctgtgcagctgatctgctctgaa
gtttctgcgcagccgatctgctctgaagtttctgcgcagccgatctgctctgaagtttct
gcgcagccgatctgctctgaagtttctgcacagccgatctgctctgaagtttctgcacag
ctgatctgctctgaagtttctgcacaggctatctgctctgaagtttctgcccaggtgatc
tgctctggagactctgcgccggtattggataaggatccaggccttggcaatttacatggt
atgatggattttaagtcaaagaagcatgtgaaattttcagttgcgcccttgctttttggg
tccaaaagaatgttactggttgcgctgaaactacccaagaaaaggaaatacaaacgttct
aaaagacggtctacattttttatggaccatcaaagcattgccgatgatcagcagacatca
acatcagaaactggtcttgctaaggacatatcatgtaaatcccatagacgcaaacactcc
cgtgcgtctgcaagtctggatactggtgatcagatgctcaacaagaaccaacatcttgct
ggtgactctagtagtgctgctgaccttcccatgggcaggaaagactacaaggatgcagca
cttgctagtgctgagctaccacactcatgcccaagtttggttgcagaccctacggattca
ataaattgtgcagatgcaaacaagagaattcctcggcattttgatctcctcacaaggggt
ttgagtgaaattactgttccacgatgggttgacattgacatgccatatacaaagacaaca
gagtttcaacatatgaggaccaacagcattggttatgtgctagatcaatgggacgaggag
tatgaccatggcaggaggaagaaggtgaggagaaagtcgaaggacgagtacggtgggccg
aaccatttccaagagataaccgatatgagatcacggcaggggaagagactaaaatctggc
cagaccagaccggggaaccagcccctcaggatatga
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