Brachypodium distachyon (stiff brome): 100826302
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Entry
100826302 CDS
T01717
Name
(RefSeq) chloride channel protein CLC-d isoform X1
KO
K05016
chloride channel 7
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bdi01009
]
100826302
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100826302
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bdi04040
]
100826302
Protein phosphatases and associated proteins [BR:
bdi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100826302
Membrane trafficking [BR:
bdi04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
100826302
Ion channels [BR:
bdi04040
]
Chloride channels
Chloride channel (CLC)
100826302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
100826302
NCBI-ProteinID:
XP_003561001
UniProt:
A0A0Q3JP19
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All DBs
Position
1:8794213..8803001
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AA seq
803 aa
AA seq
DB search
MLSGDQDIPEGIGMARLAWTRLPTVDGAAPLPESSAAASTSTSAAADELFVGAVESLDYE
IIENYAYREEQAHRGKFWVPYYIMLKWFFALLIGVGTGLAAIFINLAVENFSGWKFTMTF
AIIQHSYFVGFLVYILLNLALVFSSVYIITHFAPAAAGSGIPEIKGYLNGVDTHGILLFR
TLVGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSAKYHLNSRWVQIFESDRDR
RDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSHLMWRVFFTSAVVAVVVRSAMNWC
NSGKCGHFGAGGFIIWDISGGQEDYSYQELLPVAIIGVIGGLLGALFNQLTLYITKWRRT
YLHKKGKRVQIFEACLISLITSTVSFVLPLLRKCSPCPELENNSGIQCPHPPGTDGNFVN
FYCSKDNEYNDLATIFFNSQDDAIRNLFSAKTFHEYSAQSLITFLVMFYSLAVVTFGTAV
PAGQFVPGIMIGSTYGRLVGMSVVKFYKKLNVDEGTYALLGAASFLGGSMRMTVSLCVIM
VEITNNLQLLPLIMLVLLISKAVGDFFNEGLYEEQARLRGIPLLDSRPKQVMRNMNAKDA
VKNQKVVCLPRVSRVVDIVSVLQSNKHNGFPIVDRGQNGESLVIGLILRSHLLVLLQSKV
DFQNTPFPCGPGILNRHHFSDFVKPASSKGKSIDDIHLTDDELGLYLDLAPFLNPSPYIV
PEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLLLEENDNTETTELQSTSVRGH
LNGKMLGGNTHLDHPLLDSLMVE
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgctctccggcgaccaggacatccccgaaggcatcgggatggcgcggctggcatggacg
cgcctccccaccgtcgacggcgcggcgcctctacctgagagctccgccgccgcctccacc
tccacctccgcggccgcggacgagctcttcgtcggcgccgtcgagagcctcgactacgag
atcatcgaaaactacgcctaccgggaggagcaggcgcaccgcggcaagttctgggtgccg
tactacatcatgctcaagtggttcttcgctctactgatcggcgtgggtactggattggct
gctatattcataaatttggccgttgagaacttttctggatggaaatttactatgactttt
gctataatacaacactcatattttgtggggttcttggtctacatacttctcaatctagcc
ctcgtcttctcttctgtatacataatcacacactttgcaccagcagctgctggatctggt
atcccggagatcaaaggttacttaaatggagttgatacacatggaatcctcctttttagg
acattggttgggaagatttttgggagcattggatcagttggaggtggattggctctagga
aaagaaggtcctcttgttcatactggggcctgcatcgcttctcttcttggacaaggtgga
tctgcaaaataccacttgaattctaggtgggtacagatttttgaaagtgatcgagatcga
cgggaccttgtgacatgtggatgtgcagctggagttgctgctgccttcagagctccagtt
ggtggggtactattcgccctggaggaagttacatcatggtggagaagtcatcttatgtgg
agagtattctttacatctgctgttgtggctgttgtggtgcgatcagcaatgaattggtgc
aacagcggaaagtgtggtcattttggggctgggggtttcataatctgggacatatccgga
ggtcaagaagattactcttaccaggaacttctgcctgtggcaataatcggtgttatcggt
ggacttcttggagcgctatttaatcaactcaccctgtatataactaaatggcggcgaaca
tatcttcataagaaagggaaacgagtccagatctttgaagcttgcctcatatctttgata
acatccactgtttcctttgtgttgccactactgaggaaatgcagcccatgtcctgaacta
gaaaataattctggtatccaatgccctcatccacctggaacagatgggaattttgttaat
ttttattgctcaaaagataatgaatacaatgatctagcaactattttcttcaattctcag
gatgacgcaatacgtaacctattcagtgcaaaaacattccatgagtacagcgcacaaagc
cttatcaccttcctggtcatgttttactccttagctgttgtgacatttggaactgctgtt
ccagctggtcaatttgttccagggataatgattggatctacgtatggccggcttgttgga
atgtctgttgttaagttttataagaagctaaatgtcgacgagggcacgtatgcgctactt
ggggctgcttcgtttctcggtggttcgatgagaatgactgtgtctttatgcgttattatg
gttgagatcacaaacaacttgcaactcttgccattaatcatgctcgttcttctaatttct
aaggctgttggtgatttttttaatgaagggctatatgaagagcaggcccgattaaggggc
atccctttacttgactctaggcctaaacaagttatgagaaacatgaatgcgaaggatgct
gtcaagaatcaaaaggttgtgtgccttcctcgtgtttcaagagttgttgatattgtttct
gttttgcaaagcaacaagcataatggtttccctattgttgatcgtgggcagaatggcgag
tcacttgtcataggtctcatacttcgtagtcatttattggtgcttttacaatctaaagta
gatttccagaatactcctttcccttgtgggccaggcatactgaacaggcaccattttagc
gactttgttaaaccagcatcaagtaaaggaaagtcaattgatgatattcatttgacggat
gatgaactagggttgtatttggatcttgccccatttctaaatccttctccttacatagtg
ccagaggacatgtctttggcaaaggtgtacaatctcttccgccaactaggattgaggcat
atatttgttgttcctcggccttctcgtgttgtagggctgataacaagaaaagatctgtta
cttgaggagaatgataatactgagacaacggagctccagtcgactagtgtaagaggtcac
ctgaatggtaaaatgctcggtgggaatacacatttagatcatcctcttcttgacagtctg
atggttgagtaa
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