Brachypodium distachyon (stiff brome): 100826371
Help
Entry
100826371 CDS
T01717
Name
(RefSeq) U-box domain-containing protein 12
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
100826371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100826371
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100826371
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
U-box type E3
100826371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
HEAT_EZ
zf-RING_UBOX
ARMC9_ARM
zf-C3HC4_4
Arm_2
zf-Nse
Cnd1
ARM_LIN_C
zf-C3HC4_2
zf-C3HC4
VMAP-M7
KAP
Insc_C
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
100826371
NCBI-ProteinID:
XP_003557288
UniProt:
I1H245
LinkDB
All DBs
Position
1:complement(50832937..50839077)
Genome browser
AA seq
607 aa
AA seq
DB search
MPARVAAEIAALPEPRGPLRRLSADLARRVRLLAPLLDEPSSSPDSSSPSYPLLADALRA
ARDLLQDVHHGSKIYQAMRGGDGLLHRFAGVNRQIQVALDQLPYQTFDMPEEVQEQVALV
HSQFKRAAARTDSPDTQLSRDLDAALSDKACDAELLTRISEKLQLETMADMKKESVALHE
MVISSGGEPDGSLDQMSFLLKKLKDCVIAQAPASDTLGGRSSSVKHRSPIIPDEFRCPIS
LELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKMQVPLSHTSLTPNFVLKSLIAQWCEA
NGIELPKNKANCRDKKAVKSSDYDNAGLVSLMNRLRSGNQDEQRAAAGEIRLLAKRNVNN
RICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHENNKASIVDSNAIPKIVEVLKT
GSMEARENAAATLFSLSVVDENKVTIGAAGAIPPLINLLCDGSPRGKKDAATAIFNLCIY
QGNKVRAVKAGIIIHLMNFLVDPTGGMLDEALTLLAILAGNPEGKAVITQSEPIPPLVEV
IRTGSPRNRENAAAILWSLCSADSEQTMAARAAGGEDALKELSETGTDRAKRKASSILEL
MRQAQEA
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccagggtcgccgccgagatcgccgcgctcccggagccgcggggccccctgcgc
cgcctctccgccgacctcgcccgccgcgtccgcctcctcgccccgctcctcgacgaaccc
tcctcctcccccgactcttcctctccctcctaccctctcctcgccgacgccctccgagcc
gcgcgcgacctcctccaagacgtccaccatgggagcaagatctaccaggctatgcgaggg
ggggatggtcttctccacagattcgccggcgtcaacaggcagattcaggtggcgctggac
caattgccctaccagaccttcgatatgcccgaggaagtgcaagagcaggttgcacttgtg
cattcccagttcaagagagcggcagcgagaaccgattcgcccgacacgcagctctcgagg
gatctggatgcggctctcagcgacaaggcctgcgacgccgagcttctgactaggatctcg
gagaagctgcagctcgagaccatggcagacatgaagaaagaatcagtggccctgcatgag
atggtcatttccagcggcggcgaacccgatggctctctcgaccagatgtccttcttgctc
aagaagctcaaagactgtgtgatagctcaagctcccgcatccgacactctcggtggcagg
tcttcctctgtaaagcatcggtctccgatcatcccggatgaattcagatgccccatttcg
cttgagctgatgcaagaccccgtcattgtctctagcggccagacgtacgagagatcctgt
atccaaaagtggcttgattctgggcacaaaacctgccctaagatgcaggtgccactgtca
catacttcgctcacaccaaactttgtcctcaaaagcctgatagcacagtggtgtgaagcc
aacggcatcgagcttcccaagaacaaagccaattgccgtgataagaaagcagtgaaaagt
tctgactatgacaatgctggtctcgtctcgctaatgaataggctgcgcagcgggaaccaa
gacgagcaaagggcagctgcaggggagatacggttgcttgcaaagagaaacgtgaacaac
cggatatgcattgctgaagcaggagcaattccattgttggtcaatctactctcctcttcg
gatccaagaacgcaggaacacgccgtcacggcactccttaacctctccatccacgagaac
aacaaggcaagcattgtggactccaatgctatccctaagatcgtggaagtgctgaaaact
gggagcatggaagccagagagaatgcagcagccacactatttagcctgtcagttgttgat
gaaaacaaagtaacgattggcgctgctggtgcgatacctccacttatcaatcttctgtgt
gacgggagcccaagaggcaagaaagatgcagcaacggcaatttttaatctgtgcatatat
cagggcaataaggtccgggcagtgaaagctggaatcatcatccatctgatgaacttcttg
gtggatcctactgggggaatgcttgatgaggctctcactcttctggcaattcttgccggt
aacccagaaggcaaggctgtaattacgcaatcagagccaattcctccactcgtggaggtt
atcagaactgggtctcctcggaatagggagaacgctgcagccattctatggtctctctgt
tctgctgattctgagcaaaccatggctgcaagggcagctggaggggaagatgcactgaag
gagctgtcagagaccggcacagatcgtgcaaaaaggaaagcttctagcatccttgaactc
atgcgccaagcacaagaggcatga
DBGET
integrated database retrieval system
