Brachypodium distachyon (stiff brome): 100826383
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Entry
100826383 CDS
T01717
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG10 isoform X1
KO
K17888
ubiquitin-like-conjugating enzyme ATG10
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
100826383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100826383
04121 Ubiquitin system [BR:
bdi04121
]
100826383
03029 Mitochondrial biogenesis [BR:
bdi03029
]
100826383
Membrane trafficking [BR:
bdi04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
100826383
Ubiquitin system [BR:
bdi04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
100826383
Mitochondrial biogenesis [BR:
bdi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100826383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
100826383
NCBI-ProteinID:
XP_003558639
UniProt:
I1H8U5
LinkDB
All DBs
Position
1:complement(70168379..70176701)
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AA seq
214 aa
AA seq
DB search
MAPSLWDGTLSIDDFNASAKALMTKWREIDVEDSLPDWTWKPCCTMGVASQVEGFLALEG
VFHTGAGSQTEDNNNLSDEGTVEHDTWVQSSSDSVHVYDFHIAYSFSYKVPLLYFQGHQA
GGQLLTIDEIKKDLPAHSLNVLSESKWTFITREEHPHLSRPWFTLHPCGTSDWMKLLLGK
SGEKDLCLQYLSTWLSVVGQAVGLKIPLKLHCNS
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggcgccctccctttgggatggaactctgtctatcgacgacttcaacgcctcggcgaag
gctctgatgaccaagtggagggagattgatgtcgaagattctcttccagactggacatgg
aaaccttgctgcacaatgggggtggcatctcaggtagaggggtttctagctctcgaagga
gtgtttcacactggtgcaggaagccagactgaggataacaacaacctcagcgatgaagga
actgtagagcatgatacttgggtccagagctctagtgatagtgttcatgtttatgatttc
catattgcctacagcttttcttacaaggttccgttgctatactttcaaggtcatcaggct
ggtggacagctactaactatagatgagattaaaaaggatctccctgcccactcacttaat
gtattaagtgagtcaaagtggacatttattactcgggaggagcatccccacctaagtagg
ccatggttcaccttgcatccctgtggtacgagtgactggatgaagttgcttctaggtaaa
tcgggagagaaggatctatgtctgcaatacttgtcaacatggttatctgtagttggccag
gcagtagggttgaaaattccgctaaagcttcactgcaattcatag
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