Brachypodium distachyon (stiff brome): 100826427
Help
Entry
100826427 CDS
T01717
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100826427
Membrane trafficking [BR:
bdi04131
]
Protein recycling
Others
EARP complex
100826427
Endosome - Golgi transport
Tethering complex
GARP complex
100826427
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
RINT1_TIP1
Vps54_N
COG4_N
MPH2
Motif
Other DBs
NCBI-GeneID:
100826427
NCBI-ProteinID:
XP_003564873
UniProt:
I1HUD2
LinkDB
All DBs
Position
2
Genome browser
AA seq
833 aa
AA seq
DB search
MDKSSALEYINQMFPTEASLSGVEPLMQKIQSEIRRVDASILAAVRQQSNSGTKAKEELA
AATNAVQELMYKIHEIKTKAEQSETMVQEICRDIKKLDCAKRHITTTITALHRLTMLVSA
VEQLQVMSSKRQYKEAAAQLEAVNQLCSHFEAYRDVPKISELREKLKNIKKILKSHVYSD
FTSLGTGKETEDANLLQQLSDACLVVDALEPSVREELVKNFCNKELISYKQIFEGAELAK
LDKTERRYAWIKRRLRSNEDTWKIFPPSWHVDYLLCIQFCKITRTQLVDILNNLKEKPDV
ATLLLALQRTLEFEEELAEKFSGGTATARNKELESDDENEGVEQNKIVSDIRKKYEKKLT
VPNDEAEKDKDKQKDLSVPGAGFNFHGIISSCFEPYMAVYIELEEKSLVEQLDKLIQEEK
WETEEGSQTNILASSMQVFLVIRRSLKRCSALTKNQTLFNLFQVFQRILKAYAAKLYARL
PKGGTGIVAAATGTDGQIRISDRDEKMICYIVNTAEYCHQTSGELAENVTKMINSQFSDK
VDMSEVQDEFSAVITKALMTLVHGVETKFDAEMAAMTRVPWATLESVGDQSEYVNGISSI
LSSSVPALGSLLSPTYFQYFLDKLAASLGPRFYLNIYKCKHISETGAQQMLLDTQAVKTI
LLDIPALGKQTTVAASYSKFVSREMSKAEALLKVILSPVDSVANTYRALLPEGTPLEFQR
ILELKGLKKADQQTILEDFNKHSPSIKHPTITPTVAPPVATASVPIAPVATQAVSVTPSM
SALTGALANREDVLARAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNA
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtccagcgctctcgagtacatcaaccagatgttccccaccgaggcgtcgctg
tcgggagtcgagcccctgatgcagaagatacagagcgagattcgccgggtggacgccagc
atcctcgccgccgtccggcagcagagtaactcgggaactaaggccaaggaagaacttgct
gctgcaacaaatgctgttcaggaactgatgtacaagattcatgaaataaaaacaaaggcc
gaacaaagtgaaacaatggttcaagaaatctgccgtgatataaagaagttggattgtgcc
aagaggcatataacaactacaataaccgctcttcaccgtcttacaatgcttgtttctgct
gtcgagcaacttcaggtcatgtcctcaaaacgtcagtataaagaagcagctgcacagcta
gaggcagtaaaccagttgtgcagtcattttgaagcctacagggacgtcccaaaaatatca
gagctcagagagaaactcaagaacatcaagaaaatcctcaagtctcacgtatattcagat
tttacaagcttaggaaccgggaaggaaacagaagatgccaatctactgcagcagctatcc
gatgcttgcttggtggttgatgctttggagccgtctgtgagggaagaactagtaaagaac
ttctgcaacaaggagcttatctcatataagcagatctttgaaggagcagaacttgccaag
ttagacaagactgaaaggagatatgcatggattaagcgccggttacggtcaaatgaggat
acctggaaaatatttccaccttcctggcatgttgactatctgttgtgtatccagttctgc
aagattacaaggacccagcttgtcgatatcctgaataatctcaaagaaaagccagatgtt
gcaactttgttattggcgttgcagagaacccttgaatttgaggaagaactggcagagaaa
ttcagtggaggaactgcaactgctcggaataaagagctggaaagcgatgatgaaaatgag
ggtgtggaacagaataaaattgtttcagatattcggaagaaatacgagaagaaactgaca
gtacccaatgatgaagctgaaaaagacaaagacaaacagaaagatttatcagttcctggt
gctgggttcaactttcatggaattatatcatcttgttttgaaccatatatggctgtgtac
atagaacttgaggagaaatctttggtggaacaattagataaacttatccaggaagaaaaa
tgggaaacggaggaagggagtcagacaaacattctagcaagcagcatgcaggtgttcttg
gtaattaggagaagcttaaagaggtgcagtgcattaacaaagaaccaaacattgttcaac
ttgtttcaggtatttcaaagaatacttaaagcctatgcagcaaagttatatgccaggtta
ccaaaagggggtactggcattgttgcagctgctactggtaccgatggccagatcaggatc
tctgacagggacgagaaaatgatatgttacattgttaacactgcagaatattgtcaccaa
acatctggtgagctagcagagaatgtcactaagatgattaattctcagttttctgacaag
gtggacatgtctgaagttcaggatgaattttcagctgtgatcacaaaagcattgatgaca
cttgtgcatggtgttgaaacgaaatttgatgctgaaatggctgcaatgactcgtgttcca
tgggcgacccttgaaagtgtcggcgaccaatcggagtatgtgaatggcatcagctctatt
ttgtccagcagtgttcctgcgcttggtagccttctttcgcctacctacttccagtatttc
ctcgacaaactggcagcctcgcttggtcctcggttttatctcaatatatacaagtgcaag
catatatcggaaactggtgcacagcagatgcttttggacactcaagctgttaagactatt
ctattagacatcccagctctcggtaaacagactacagttgcggctagctactcaaagttc
gtaagccgggaaatgagtaaagctgaggcactcctcaaggttattttgtcaccagttgat
tctgttgctaatacctaccgtgctctcttaccggaaggcacacctctcgaatttcagcgg
atacttgagctcaagggcttgaagaaagcggaccaacaaactatactggaagatttcaat
aagcatagccccagcatcaaacaccctaccatcactccgacagttgcaccaccagttgct
actgcatctgtccctattgcaccagttgcaactcaagccgtttcagtaacaccgagcatg
tccgctttgacgggtgctctggccaaccgagaggatgtgctcgcccgtgctgcagcactt
ggacgaggcgctgccacgacagggttcaagaggttccttgcattgacagaggcagccaaa
gatcggaaggacgggccgttccgcaagcttttcaatgcataa
DBGET
integrated database retrieval system
