Brachypodium distachyon (stiff brome): 100826549
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Entry
100826549 CDS
T01717
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03015
mRNA surveillance pathway
bdi04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100826549
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100826549
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bdi01009
]
100826549
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100826549
03036 Chromosome and associated proteins [BR:
bdi03036
]
100826549
Protein phosphatases and associated proteins [BR:
bdi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
100826549
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
100826549
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
100826549
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B56
TOF-1-like_helical
Motif
Other DBs
NCBI-GeneID:
100826549
NCBI-ProteinID:
XP_003569694
UniProt:
I1HCL5
LinkDB
All DBs
Position
2
Genome browser
AA seq
484 aa
AA seq
DB search
MWKQFIGKLSWKSLKSSPGGGGGSPTAKSHPMSPRENGGSGKPNASPTSPSGVAAAEGRS
REDAFIQKVNICCTVYDFADRGKDSPEKERKRQVLMSLVDCIGAAEEPLTEAMMSACVHM
FGVNLFRVFPPKVRSGTAASETEEDDPFFDPSWYHLQVVYELLLRFVTSPFVDPKVARKY
VDSSFVSKLLDLFDSDDPRERDCLKTVLHRIYGKFMGNRPFIRKAVSNIFYRFVSEADHH
NGIAELLEVFGSVISGFAKPLKEEHKLFLWKALIPLHKPKTVGGYLPQLTYCITQFIEKE
PKLAGTVIRGLLKYWPITNSQKEMMFLGELEEVLELIDMAEFQKCMVPLFRRIATCLNSS
HFQVAERALFLWNNEHLFDMISQNRQVIVPIVYPALERNARWHWNQSVLNVTMNVRKMFF
DMDERLLLACQSNFQLEEEKRTAAEERRRLVWKQLERNAQPVVAGSASFPQPSSSVPPVV
PTVT
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagcaatttattggcaagctgtcgtggaaatcgctgaaatctagccctggaggc
ggagggggctcgcctacggcgaagtcgcaccctatgtctcccagggaaaatgggggctcg
gggaagccgaacgcttcgcctacgtcgccctcaggggtcgctgcagccgaggggaggtcc
agggaggatgcattcatccagaaggtgaacatttgctgcacggtatacgactttgctgac
cgggggaaagactcgccggagaaagagaggaagcggcaggtcctgatgtccctcgttgac
tgcattggtgctgccgaggagcccctcacagaggcgatgatgtcggcgtgcgtgcacatg
tttggtgttaacctcttcagggtcttcccacccaaggtgcgatcaggcacggcggcatcc
gagacagaggaggacgacccattctttgacccctcatggtaccacctgcaagtcgtgtat
gaattgcttcttcggtttgtcacttcaccgttcgttgatcccaaagtggctaggaaatat
gtagacagttcattcgtctcgaagctacttgacctatttgattctgatgacccaagagag
agggactgcttgaagacagtattgcataggatatatggaaagttcatgggaaatcgaccg
ttcattcgtaaggctgtgagtaatatcttctataggttcgtctctgaggctgatcatcac
aatgggatagccgagctgttggaggtgtttggcagtgtaataagtgggtttgccaagcca
ttgaaggaggaacataagttgttcctatggaaagcattaattccccttcacaagcctaag
acagtgggcggatatctgccacagctgacttactgcataacgcaatttattgagaaggaa
cctaagcttgcaggaactgtgatcagaggtctgttgaagtattggccaattaccaatagt
cagaaggagatgatgtttttgggggagttggaagaggtgctcgagttaattgacatggct
gagttccagaagtgcatggtgccattgttccggaggattgcaacttgcctgaatagctcc
cacttccaggttgcagagagagccttattcttgtggaacaatgaacatttgtttgatatg
atatcccaaaaccgtcaagtgattgtgccaattgtatatccagctctggagagaaatgcc
cgctggcattggaaccaatcggttctcaacgttacgatgaatgtgaggaaaatgttcttc
gacatggatgagagattgctcctggcttgtcagagcaacttccaattagaagaagagaag
cgaactgcagccgaggagcgtcgaaggcttgtctggaagcaactggagcggaatgctcaa
ccagtggtagctggtagtgcgagctttccacagccctcttcatctgtgcccccagtagtt
cccactgtgacatga
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