Brachypodium distachyon (stiff brome): 100826600
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Entry
100826600 CDS
T01717
Name
(RefSeq) SWI/SNF complex subunit SWI3C
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100826600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100826600
03036 Chromosome and associated proteins [BR:
bdi03036
]
100826600
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100826600
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100826600
PBAF complex
100826600
GBAF(ncBAF) complex
100826600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
DUF7685
Thioredoxin_5
Motif
Other DBs
NCBI-GeneID:
100826600
NCBI-ProteinID:
XP_003578845
LinkDB
All DBs
Position
4:complement(45318783..45326187)
Genome browser
AA seq
778 aa
AA seq
DB search
MPRKASSSDAKLKWRKRKRSQDPSPSNLADHSDDSDSAAANDDADDAPHGAANGGETLGA
GAGGDDNAVLGLCEAEALSSPEPISGFPLASRRPVIRPHPSVLAVIAADRAVAGGSCASA
APAPPLENISHGQLQVLAAMLPDNPSLSNDPDLPSSYVCTVPPLMEGQGVPKQFYGKLLV
VPRHSDWFSPMTVHRLERQVVPHFFSGKSPGHTPEKYIMLRNKVIVKYLERPARRLAFAE
CQGLVTSTAELYDLSRIVRFLDTWGIINYLAAGSVHRGLRLAQSLIREEQTGELQLASAP
LKSIDGLILFDRPKCSLRPEDIASVASTSSVPAVANGDTSLADLDEKIWERLSENFCTYC
LQPLPSLHYESQKEADVSLCSDCFHDARFVPGHSSLDFLRVDGKKNGLDNDGDSWTDEET
LLLLEGVEKYNDNWNGIAEHVGTKSKAQCIHHFISLPVEDGLLESIEVPQASVSSRVQSN
GFLHSNSNGNISGSYPQCSQPGQQLPFINSANPVMSLVAFLASAVGPRVAASCANAALSV
LTRDDSRMSSEGNDIMGHPARPNYDTSSSVSPENVKYAAMCGLSAAATKCKLFADQEERE
IQRLAATIINHQLKRLELKLKQFAEIETLLLKESEQVERARQNLTAQRVRVMSARFASAG
GSMPGGSSTMVSNPMSQASPRAPAMPGSVPQASMPAFYANNMQGHPAQMAFLQQQQRQQH
QHQQMLSFGPRLPLSAIHPGSTSSGPSVMFNPGMPNSVTPNHHPMLRPPSGNNSGSFG
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaaggcctcgtcctcagatgcgaagctcaagtggcggaagcggaagcgctcg
caggacccgtccccctcgaatctggccgaccactcggacgattccgactccgccgcggcc
aacgacgacgccgacgacgcgccccacggcgccgctaacgggggtgaaaccctaggcgcc
ggcgccggcggtgatgacaacgccgtgctcggcctctgcgaggcggaggcgctctcctcg
cctgagcccatctccggctttcctctggcctcccgccgccctgtcatcaggccccatccc
tccgtgctcgcggtcatcgcggctgatcgtgccgtggctggtggcagctgcgcctcggcc
gcccctgcaccgccgctcgagaacatctcgcacgggcagctccaggtgcttgctgccatg
ctccccgacaacccgtccctgtccaacgaccctgacttgccgtcctcctatgtctgcacc
gtgcctccgcttatggaaggccaaggcgtgccaaagcagttctatggcaaattgcttgtc
gtgcccagacactcagattggttctcacccatgacggtgcacaggttggagaggcaggtg
gtgcctcatttcttctcagggaagtccccagggcatacgccagagaagtacataatgttg
aggaataaggttattgtgaagtatttggagcgccctgcaaggagacttgcatttgccgag
tgccaggggcttgtcactagcactgctgaattgtatgacctgagtaggatagttagattc
ttggacacttgggggatcattaactaccttgcagctgggtctgtgcaccggggcttgagg
ctggcacaatccttaatcagggaggagcaaacaggggaactgcagctggcgtctgcacca
ttgaaatcaattgatggcttgattttgtttgatcgtccaaaatgcagtctccggccagag
gatattgcttctgtggcttcaacttcgtctgttccagcggtggcaaatggtgatactagt
cttgcagatttggatgagaagatttgggagcggttgtcagagaatttttgtacttactgc
ttacaacctttgcccagcctgcactatgagtcacaaaaggaggcagatgtttctctttgc
tcggattgcttccacgatgcaagatttgttcctgggcactcaagcttagattttctgaga
gtggacgggaagaaaaatggattagataatgacggtgacagttggactgatgaggaaact
ttgctgttgctggagggtgtagagaagtataatgataattggaatggtatcgcagagcat
gttggaacaaagtcgaaggcacaatgtattcaccattttatttctcttccagttgaagat
ggcttgttagagagcattgaagtaccacaagcatctgtttcgtctagagtgcaaagcaat
ggatttttgcattcaaattccaatggaaacatttcaggtagctatcctcaatgtagccaa
cctggacaacagcttccattcatcaattctgctaatccggtcatgtcactggttgcattt
ttggcctctgcagtgggaccaagagtagcagcatcctgtgcgaatgcagcgttatctgtg
ttgacgagagatgattccaggatgtcttcagaaggcaatgacattatgggtcatcctgct
cgtccaaactatgatacttcatcatctgtctctccggaaaatgtgaaatatgctgcaatg
tgtggcttgtcagcagcagcaacaaagtgtaaactttttgcagatcaggaggagcgtgaa
attcagagattagccgccaccatcataaatcatcagttaaagagattggagttgaagttg
aagcaatttgcagagatcgagaccctgcttttgaaggaaagtgagcaagttgagagggcc
aggcagaatctgacagcccagcgtgtccgggtgatgtcagctcggttcgcttccgctgga
ggctccatgcctggaggcagcagtaccatggtatcaaatccaatgagtcaagccagccct
cgagcaccagcaatgccaggctcagtgcctcaggccagcatgccagcattttacgccaat
aacatgcagggccatccagcgcagatggctttcttgcagcagcaacagaggcagcaacat
cagcatcagcagatgctctcattcgggcctcgcctgccgctctcagctatccaccctggc
tcaacgtcatcagggcccagcgtcatgttcaaccccggcatgcccaattcggtgaccccc
aaccatcatccaatgctgagaccgccctccggcaacaattcggggagttttggttaa
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