Brachypodium distachyon (stiff brome): 100826635
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Entry
100826635 CDS
T01717
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bdi01002
]
100826635
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100826635
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100826635
Peptidases and inhibitors [BR:
bdi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100826635
Ubiquitin system [BR:
bdi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100826635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
100826635
NCBI-ProteinID:
XP_010227945
UniProt:
I1H0C2
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All DBs
Position
1:45990306..45996880
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AA seq
938 aa
AA seq
DB search
MAEVSTAAAPAAPEGVLHRRIEFHLARKPHAPVALGGGGFRMETLNPDAADGAAAAAAAA
ARSELEVKRPEKAEAAALDPELTVARIYLGRIGAGLQNLGNTCYLNSVLQCLTYTEPFAA
YLQSGRHKSSCRTAGFCALCALQNHVKTALQSTGKIVTPSQIVKNLRCISRSFRNSRQED
AHELMVNLLESMHKCCLPSGVPSESPSAYEKSLVHRIFGGRLRSQVKCTRCSHCSNKFDP
FLDLSLDIAKASNLVRALQNFTEDELLDGGQKQYQCERCRQKVVAKKRFTIDRAPNVLTI
HLKRFSPFNPRDKIDKKVDFQPVLDLKPFVSDSKVSDYKYSLYGVLVHAGWNTQCGHYYC
FVRTSSGMWHNLDDNQVRQVREADVLKQKAYMLFYVRDRVVDTVARKDPPNVPVKKMNPG
KISCLNGGIQSGAIEAKLSGLSSPSVDKKLQSISIGHSGVGSMTSVDRCSNNDGKTENPA
ASQNTMLSTAQKGPLSQNDDATLSTKSKQVALSDHKETSSPCQSASLISASGNQTMAKMS
LQEPMTGGAFTKLGNNTSVASPIVSSPPGLFGAEKQTFCSQPTIYAKQTFNVNNTDTGFT
AQNLPTKDGIVSNGVIPSISSGGPTCSEKVNDLTESLKRDDSAVKELSMSKKENTIVPGL
EQVDVEKQADSCNGRMARRVDTKPTKLVRYPVVNFWLGPRSLLLGSLKLQKKKKHKRTKR
RHAVYKDVEIADCSGANTNEQQASTSATVSSETAQCTPRKRKHSYASVSSENDTEALKKR
QQVVGASDAGDHNIDIRKRNSASSGGAEPPKMGSSSYANQAHPRNNIDASTGATSQHVAI
HLKDLSGEVTVPCWDDVGVRNTETGECKSSGRRSIGYVLDEWDEEYDRGKTKKVRKAKED
NYDGMNPFQEEANSVSDRKTRRKAFQARLLNKPARSHH
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtgtccacggcggcggcgccggcggcgcccgagggggtgctgcacaggagg
atagagttccacctcgccaggaagcctcatgcgcccgtggccctaggtggaggcgggttt
cgaatggaaaccctgaatccggatgccgcggatggggcggcagcggcggcggcggcggcg
gcgaggagtgagctcgaggtcaagaggccggagaaggcggaggcagctgcgttggatccg
gagctcaccgtggccaggatctaccttgggagaattggtgctggtctgcaaaatcttggg
aacacttgctacctcaactcggttctgcaatgcttgacatacacggagccgtttgcagca
tacctgcagagtggacggcacaagtcttcatgtcgtactgctggattttgtgcattatgt
gctcttcagaaccacgtcaagactgctctacaatcaactggaaaaatagtgacaccatca
caaattgtgaagaacttgcgctgcatttctcgtagtttccgcaattcgaggcaggaagat
gcacatgagttaatggttaacttgcttgaatccatgcataaatgctgtttgccttctgga
gtaccaagcgagtctccgagtgcttatgagaagagcttagttcacagaatatttggtggc
cgcctaagaagtcaggtgaaatgcacaaggtgttctcattgttccaacaaatttgatcct
ttcttggatctcagtcttgatattgccaaggcctcaaatttggtgagagcacttcaaaat
ttcactgaggatgaactactcgatgggggtcaaaagcagtatcaatgtgagcgctgcagg
cagaaagttgtagcaaagaaaaggtttacaattgatagagctccaaatgttttgacaatt
catctgaagcgctttagccctttcaatcctcgtgacaagattgacaaaaaagtggatttt
caaccggttctagacttgaaaccatttgttagtgattctaaagtatcagattacaaatac
agcctttatggtgttttggttcatgctggttggaatactcaatgtggtcattattattgc
tttgttcggacttctagtgggatgtggcacaatcttgacgataatcaggtacgccaagtt
cgtgaggcagacgtattgaaacagaaagcctatatgttattttatgtacgcgacagagtt
gttgacacggtggcgcgtaaagaccctcctaatgtgcctgtaaagaaaatgaaccctggg
aagatctcatgtcttaatggtggaatccaaagtggtgcaatagaagcaaaattgagtggt
ctgtcatctccttctgtagataagaagctgcagagcataagcattggccactctggtgtt
ggcagtatgacttcagtagaccgttgttcaaataatgatggcaaaactgaaaatcctgca
gcctctcaaaacactatgctatctacagcacagaaaggtcctttatcccaaaatgatgat
gctactttgtcaactaaatcaaagcaagttgctttgagtgatcataaagagacatcttca
ccatgtcaatctgcatctcttatctcagcgagcggcaatcaaacaatggctaagatgtca
ttgcaggaaccaatgactggtggtgcatttaccaagctcggaaacaatacttctgttgcc
tcacctatcgtgagtagtcctcctggactgtttggggcagaaaaacaaactttttgctct
caaccaactatatatgccaagcaaactttcaacgtgaataatacagacactggatttact
gcacaaaatctcccaactaaggatggtattgtatcaaatggggtcatccctagcattagc
agtgggggtccaacttgcagtgagaaagtgaatgacttgacagaatctctgaaacgagat
gacagtgcagtgaaggaactttctatgagcaagaaggagaacaccatagtaccaggactt
gaacaagtcgatgttgaaaaacaagctgattcatgtaatggaagaatggctagaagggtg
gacacaaagccaactaaacttgtgagatatccagtagtgaacttctggcttggaccaaga
tcactgttactaggttcacttaagctacaaaagaaaaagaagcacaagagaaccaaaaga
cgccatgcagtttataaggacgtggaaattgctgactgttctggtgctaacaccaatgag
cagcaggcatcaacatcagcaactgtgtcatctgaaactgcacaatgtacacctcgtaag
cggaaacattcctatgctagtgtaagttctgaaaatgataccgaagcattgaaaaagagg
cagcaagttgttggagctagtgatgctggtgatcacaacatagatatcagaaaaagaaat
agtgcaagttctggcggcgccgagcctccaaagatgggttcgagctcttatgcaaatcaa
gcacatccaagaaacaatatagatgcaagcacgggagccacctcccaacatgttgctatt
catttaaaggacttgagcggagaagttactgttccatgctgggatgatgttggtgtgcgg
aacactgagactggcgagtgcaaaagttcagggaggaggagcattggatatgtgttagat
gaatgggatgaggagtatgaccgcggaaagacaaagaaggtcagaaaagcgaaggaagac
aactatgatgggatgaaccccttccaggaggaggccaactctgtatctgatcgaaagacg
agacgaaaagcgttccaagccagacttctgaacaagcctgccagatcacatcactag
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