Brachypodium distachyon (stiff brome): 100826818
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Entry
100826818 CDS
T01717
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bdi01002
]
100826818
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100826818
04121 Ubiquitin system [BR:
bdi04121
]
100826818
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100826818
Peptidases and inhibitors [BR:
bdi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100826818
Membrane trafficking [BR:
bdi04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
100826818
Ubiquitin system [BR:
bdi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100826818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Motif
Other DBs
NCBI-GeneID:
100826818
NCBI-ProteinID:
XP_024311472
LinkDB
All DBs
Position
5:13510654..13516023
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AA seq
535 aa
AA seq
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MGRFEHGNLLVSLSDGNRHGYSLTAVAVVLGMAAAGLCKALHSSSVIPSWDFRKFFSGSE
RLYYSGGLENLGNNCFLNVILQALASCGHFVSSLDGLLVSDGALPEEQSEKMPLIFALSS
LLKDLSIVRGERTVLNPRRVMHALSFYVSHFNLTRQQDASEAFLHLLTSMRDEFSHCYVP
HRSSLADITMFPSKVYMQREGYEPECRRWIKNIFGPFDGTIGSTLSCRNCSSVLSLDFEN
FHCLPLSPVSDRDGDIINGCTLVDCLKHFTVLEHIDNYRCDHCWHSAAAKYFSRQSEVDE
EKVNKLRTCVDYDSCSCRHIFGPEKIAWTVSSKATKQLAITRCPKILCIHLLRASISLDG
ELIKREGHISFPLLLDLSPFAGGTFSNGHGPEPSAMNMQKYDQPSLHLYRQLNAQMPINM
FPTGGNLSSHPHKDELTNGGGCSPYKGNVAVATSSLSPSSSRNELYGLSAVIEHYGICGG
GHYAAYRRVLSNSDTGDLVGPRRRHWLYVSDDHVSQVSEGDVLAAEATLLFYERL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggtttgagcacggcaatctactggtatctcttagtgacggaaaccggcatggt
tatagtcttacagccgtagctgttgtactggggatggcagctgctgggttgtgcaaagcg
cttcatagcagttctgttataccatcatgggattttcggaagttcttttcaggatcagag
agactatactactctggaggcctggaaaatcttggcaataattgctttcttaatgttatc
ctgcaggcacttgcgagctgtggccattttgtgtcctctctagatggtttgcttgtaagt
gatggcgcactacctgaggaacagtctgagaaaatgcctcttatctttgctttaagttcc
cttttaaaagacttgagcatagttcgaggcgaaagaactgtactgaatcctcgaagagta
atgcatgctttgagcttctatgttagccacttcaatttgaccagacagcaggatgcttcg
gaagcttttcttcatctattgacatcaatgagggatgaattttcccattgttatgtaccg
cataggagctctctggcagacatcaccatgtttccctccaaagtatacatgcaaagggaa
ggttacgaacctgaatgcaggcgctggataaaaaacatatttggtccctttgatgggact
attggcagcacattatcttgcagaaattgttcatctgtgctgtcattggacttcgagaat
tttcactgcctgccgctctcacctgtttctgatagagatggagatattattaatgggtgt
actttggtggattgcctgaagcacttcactgtgctggagcatatcgacaattatcgttgt
gatcattgttggcatagtgctgctgccaaatatttctctcgtcagtcagaagtcgatgag
gaaaaggttaacaaactgcgcacctgtgtcgactatgacagttgtagttgcaggcacata
tttggtccggaaaaaatagcgtggacagtatcttcaaaagcaacgaagcagttggctatc
actcgttgtccgaagatcttgtgcattcatttgctacgtgcttctattagtctagatggt
gaactcataaagcgcgagggacacatttcttttcctttacttctcgatctatccccattt
gcaggaggcacattcagcaatggtcatggacctgaaccttcagcaatgaacatgcaaaaa
tatgaccagccatctctccatctgtatcgacaactaaatgcacagatgcccattaatatg
tttcctactggtgggaacttgtcaagtcatccacacaaggatgaattgacaaatggtggt
ggatgctcaccgtacaagggaaatgttgctgtggctacaagttctttatcaccatcctca
tcaagaaatgagttatatggtctttcagctgtcattgagcactatggtatatgcggaggt
gggcattatgcagcatacaggagagtactgtcaaattctgacactggtgatctagtgggg
cctcgtcgcagacactggctttacgtctctgatgatcatgtatcacaagtgtcagagggt
gatgttttggctgcggaagccacactcctcttctacgaaagactctag
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