Brachypodium distachyon (stiff brome): 100826932
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Entry
100826932 CDS
T01717
Name
(RefSeq) protein argonaute 1B isoform X2
KO
K11593
eukaryotic translation initiation factor 2C
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100826932
03036 Chromosome and associated proteins [BR:
bdi03036
]
100826932
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100826932
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100826932
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
100826932
microRNA pathway
RISC loading complex
100826932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
Gly-rich_Ago1
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
100826932
NCBI-ProteinID:
XP_003580340
UniProt:
I1J0N3
LinkDB
All DBs
Position
5:complement(21720460..21739189)
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AA seq
1094 aa
AA seq
DB search
MVRKKRTGPASPGESSGEASGASGQGSSQRTERAPQQHGGGRGWVPPQGGRGGGPHQGRG
GPYQGPGGPAPPEFQQRDYQGRGHAGGGPPEYQQRDYQGRGHPGGGPPEYQPRDYQGRGG
PRPRGGGMPQPYYGGHRGGSGGRNVPPGPSRTVPELHQAPHVQYQAPMVSPSASGAGSSS
QPVVEVSSGQVQQQFQKLAIIDQSSTSQASQLAPASSKSVRFPLRPGKGTYGDRCVVKAN
HFFAELPDKDLHQYDVTITPEVTSRGVNRAVMAELVKLYRQSHLDGRLPAYDGRKSLYTA
GPLPFTSRTFEITLQDEEESLGGGQVVPRRERQFRVVIKFAARADLHHLAMFLAGRQPDA
PQEALQVLDIVLRELPTARYSPVGRSFYSPNLGRRQKLGEGLESWRGFYQSIRPTQMGLS
LNIDMSSTAFIEPLPVIEFVAQLLCRDISVRPLSDSDRVKIKKALRGVKVEVTHRGNMRR
KYRISGLTSQATRELSFPVDERGTVKTVVQYFLETYGFNIQHTTLPCLQVGNQQRPNYLP
MEVCKIVEGQRYSKRLNEKQITALLKVTCQRPQEREKDILTTVHHNAYYEDPYAQEFGIK
IDERLASVEARVLPPPRLKYHDSGREKDVLPRIGQWNMMNKKMVNGGRVSNWACINFSRN
VQDSAAKGFCHELAIMCQISGMDFAPEPVLPPLTARPEHVERALKARYQDAMNIIRPQGR
ELDLLIVILPDNNGSLYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVG
GRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGL
VSAQAHRQELIQDLFKVWQDPQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQ
FYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPG
TVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARC
TRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASGARGPPQGGSRSTRAFGNVAVRPL
PALKENVKRVMFYC
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggttaggaagaagagaactggtcctgccagccctggagagagttctggggaggcttcg
ggagcttctgggcagggttcctcacagcgaactgaaagagctcctcaacagcatggtggt
ggacgtggttgggtacctccacagggtggccgtggtggtgggccacaccaggggcgtggt
ggaccctatcagggccctggtgggccagctccaccggaatttcaacagcgtgattatcag
ggacgtggacatgcaggtggtggcccacctgaatatcaacagcgtgactatcagggacgt
ggacatccaggtggtggtccacctgaatatcagccgcgtgactatcagggacgtggtggt
ccaaggcccagaggtggtggaatgccgcagccatactatggtgggcataggggaggtagt
ggtggacgcaatgttcccccaggtccatcaagaacagttcccgagctgcaccaagcccct
catgtccaatatcaagccccgatggtttccccatccgcatcgggagctggctcatcctct
cagcccgtggtggaggtgagcagtggacaagtccagcaacagtttcaaaaacttgccatc
attgaccaaagttcgaccagccaagcctctcaactggcaccagcgtcgagcaaatcagtt
agattcccattgcgccctggaaagggtacatatggggataggtgtgtcgtcaaggcaaac
catttctttgctgagcttcctgataaggacctccaccaatacgatgtgaccataacgcca
gaggttacatcacgtggtgttaatcgtgctgtgatggcagaacttgttaagctttacaga
caatctcatttggatggacgtttacctgcttatgatggaaggaagagcctctatacagct
gggccgttgccgtttacgtcaaggacatttgaaattactctgcaagacgaagaagaaagc
cttggtggtggacaagtcgtgccaaggcgcgagagacaattcagggtggtgatcaaattt
gctgctcgtgctgatctccaccatttggctatgtttctagctgggaggcagcctgatgca
ccacaagaagctcttcaggtgcttgatattgtgctacgtgaattgcctactgcaaggtat
tctccagttggccgatcattttattctccaaacttagggagacgtcagaaacttggtgaa
ggtttggaaagttggcgtggattttaccaaagtataagacctacacagatgggactatcg
cttaatattgatatgtcttctactgcatttattgagcctctccctgtgattgaatttgtt
gctcagcttctgtgtagagacatctcagttagaccgctgtctgattcagatcgtgtgaag
attaaaaaggcgttgcgaggtgtaaaggtggaggtgacgcatcgagggaacatgcgtagg
aaatatcgtatatctggtctaacgtcacaagctacacgagagctatcattccctgtcgat
gaacgtggtactgtaaaaaccgtggtgcaatacttcctggagacatatggttttaatatt
cagcacaccactctgccttgcttgcaagtgggcaatcagcagaggccgaattatcttcct
atggaggtttgtaagattgttgaaggacaacgttactcgaagcgcctgaatgagaaacag
ataactgctctactgaaagtcacttgccaacgccctcaggagcgcgaaaaggatatcttg
acgactgtgcatcacaatgcatactatgaggatccatatgcacaggaatttggcataaaa
attgatgagcgccttgcatcggttgaagctcgtgttcttcccccgccaagacttaagtac
catgatagtggcagagagaaggatgtcttgcccagaatcggccagtggaatatgatgaac
aagaaaatggtgaatggtggtcgagtcagtaactgggcatgtattaacttctctcggaat
gttcaagatagtgctgccaagggtttctgccatgagctggctataatgtgccaaatatct
ggaatggactttgcacctgaacctgtgctacccccacttaccgcgagacctgagcatgtg
gaaagagcactaaaggctcgttatcaagatgccatgaacataatcagaccccagggcaga
gaacttgatctgctaattgttatactgcctgacaataatggttctctttatggggatctc
aaaaggatttgcgagactgatctgggattggtatctcaatgttgtctcacaaagcacgtc
tttaagatgagcaagcagtatcttgccaatgtagcacttaaaattaatgttaaggtagga
ggaaggaatactgtacttgttgatgctttgacaaggaggattccccttgttagtgacaga
ccaaccataatatttggtgctgatgttacacatcctcatcctggtgaagattccagtcct
tccattgccgcagtggttgcttcccaagactggcctgaggtcaccaagtatgcaggatta
gtgagcgcacaagcccatagacaagagttgatacaggatctatttaaagtatggcaggat
ccccaaagaggaactgtgactggtggcatgatcaaggagcttctcatttctttcaagagg
gcaactgggcaaaagccacagcgaatcatattttacagggatggtgtcagcgaaggacag
ttctatcaagttctgttgtatgagcttgatgccattagaaaggcctgtgcatccttggag
ccaaattatcagcctccagttaccttcgtagttgtccagaagcgtcatcataccaggctt
tttgctaataaccacaacgatcagcgtactgtggatagaagcgggaatatactgcctggc
actgttgttgattccaagatttgccatccgacagagtttgatttctacttgtgtagccat
gctggcattcagggaacaagccgccctgctcattatcatgttctgtgggatgagaacaaa
tttactgctgatgagttgcaaactctcacaaacaacttgtgctacacgtacgcaaggtgc
acccgctctgtatcaatagtgccgccggcatattatgcacatttggcggccttccgagca
agattttacatggagccagatacctctgacagtgggtccatggcaagtggtgcccgtggc
cctccacagggtggttcgcgcagtacaagggcgtttgggaatgttgctgtcaggcctctg
cctgccctcaaggaaaacgtgaagcgtgtcatgttttactgttaa
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