Brachypodium distachyon (stiff brome): 100826958
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Entry
100826958 CDS
T01717
Name
(RefSeq) protein CHROMATIN REMODELING 35
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100826958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100826958
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
100826958
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GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
RAG1_imp_bd
Motif
Other DBs
NCBI-GeneID:
100826958
NCBI-ProteinID:
XP_024314539
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Position
2:18795434..18800662
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AA seq
768 aa
AA seq
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MDAAAAATKIFRRNHRCEALSVNFVATYFLRCTCESKKAASDVEKIAETQTSPALPGSHV
DGDAETAPRKRKRENERDSAAVDLPSNTYNPVEEEEPMEDGKPKKESNGHQDIWNAFDMA
LENSKLDTPEDVPNIKEVSEKEVKIDCNHQIEIHEDLGHVCRICSMIVRKADMIFDFEWR
KVSSRSRSYFKETRSSEIVLGNVTVYEDLTALDVAIHPRHAQHIRPHQLEGFHFLVKNLV
CDKPGGCILAHAAGSGKTFMIICFIQSFLAKHPSARPLVVLPKGIVGTWKREFQRWQVED
IPLYDFYSVNATKREDQLKILYSWQSNMSILFLGYEQFSKIICFNGDEIAGAACRDMLLM
APNLLIMDEGHTPRNKETNLQDSLSQVQTPRKVVMSGTLFQNHVKEVVSILNLVRPKFLN
TGSTRPIARRSMSQVAISGKKIPKDPRKFDKVFAESVEETLLHDVNFTRKKHVIRSLREL
TEGVIHYYKGDILHELPGLIDFSVFLKLSPMQKESIQKLEAYEYLKSSAVGTALYVHPCL
FEMSEAGAADRAKNLTDATVDTLVESVQLSDGVKANFFINILKLASSAGEKLLAFSQHIL
PMKFLERLLVNMFGWRVGKEIFAITGDTSAADRELAMDKFNNSADSKVLFGSIKACGEGI
SLVGASRVVILDVHLNPSVTRQAIGRAFRPGQKKKVFVYRLVAADSPEENFHEIALRKEG
IAKLMFEWNGRQCTAENFELNRVYISNCQDEFLHNNAMRWDIKALYTR
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgcggccgccgccacgaagatcttccggcggaatcatcgatgtgaggcactg
agtgttaattttgtggcgacctacttcttgcgttgtacgtgtgaaagcaaaaaggctgct
agcgacgtggagaagatagcagaaacacaaacttcccctgctcttcctggctcccacgtg
gatggagatgctgaaactgccccaagaaaaagaaaaagggaaaacgaacgagattcagca
gcagttgatttgccttcaaacacctacaaccctgtggaggaagaggagcctatggaagat
ggtaaacccaagaaggaaagtaatggtcaccaggatatttggaatgccttcgacatggca
ctggaaaactccaagcttgacacacctgaagatgtacccaatataaaagaagtgagtgaa
aaagaggtgaagattgactgcaatcatcaaatagagattcatgaagatctaggccatgtc
tgccgtatctgcagtatgattgtgagaaaggctgacatgatatttgattttgagtggaga
aaggtatcatcaaggtcaaggtcatatttcaaagaaacacgttctagtgagattgtcctt
ggtaatgttacagtatatgaagatctcactgctttagatgttgccattcatccaagacat
gcacaacatatcaggccgcatcagttggaaggattccacttcttggttaagaatttagtc
tgtgacaaacctggaggatgcattctagctcatgccgctggttcggggaaaacatttatg
atcatatgtttcattcagagcttccttgcgaagcatccgtctgcaaggcctcttgttgta
cttcccaaaggcatagttggtacgtggaagagggaatttcaacggtggcaagtggaggac
ataccactgtatgatttctattctgttaatgctacaaaaagagaagatcagctgaaaata
ctctactcttggcaatccaatatgagcattctgtttcttggatatgagcagttctctaag
atcatttgctttaatggagatgaaattgctggagctgcgtgccgggacatgttgcttatg
gcgccgaacctactgataatggacgagggtcatacacctaggaataaggagaccaatctg
caagattcactgagccaagtacaaacgccacgtaaggtggtcatgtctggcactcttttc
cagaatcatgttaaggaagtggtcagcatattgaaccttgtgcgcccaaagtttctcaat
acgggatcaactcgtcccatcgctcgacgtagtatgagtcaggtagcaatatctggtaag
aagattccaaaagatcctcgtaagtttgacaaggtatttgctgagtcagtcgaagagacc
ctgctgcatgatgtgaacttcacaagaaaaaaacatgttattagaagtctcagagaacta
acagaaggtgtgattcactactacaagggtgatatcttgcatgagttacctggcctaata
gacttcagcgtctttttgaaactcagtcccatgcaaaaagaatccatccagaagttagaa
gcctatgagtatcttaaaagtagtgcagtaggaactgcactatacgtgcatccttgtctg
tttgaaatgtcagaagctggtgctgcggacagagctaaaaacttgacagatgcaacggta
gatactttggttgagtctgtgcagctgagtgatggtgtgaaggccaatttcttcattaat
attctgaagctagcttcttctgcaggagagaaattgcttgcttttagtcagcatatactc
cccatgaaatttttggaaaggttgttggtcaacatgtttggctggcgtgtaggaaaggag
atatttgcaataacgggtgatactagtgcagcagacagagaattggccatggacaagttt
aacaactctgctgattctaaagttttgtttggttctatcaaggcatgtggggagggcatt
tcccttgtaggtgcatccagagttgtcatcctagatgttcacctgaacccatctgttacc
cgtcaagcaatcgggcgtgccttccggcctggacagaagaagaaagtatttgtctacagg
cttgtagctgctgattctccagaggaaaactttcatgaaattgcattgaggaaagaaggc
atagcaaagctgatgtttgaatggaatgggcgacagtgcactgctgaaaacttcgaactg
aaccgagtttatataagtaactgtcaagatgaatttctgcacaataatgcgatgcgctgg
gatatcaaagctttgtatacaaggtga
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