Brachypodium distachyon (stiff brome): 100827067 Help Entry 100827067         CDS       T01717                                  Name (RefSeq) symplekin isoform X2   KO K06100   symplekin Organism bdi  Brachypodium distachyon (stiff brome) Pathway bdi03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:bdi00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     100827067  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:bdi03021]     100827067    03019 Messenger RNA biogenesis [BR:bdi03019]     100827067 Transcription machinery [BR:bdi03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      100827067 Messenger RNA biogenesis [BR:bdi03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      100827067     U7-dependent histone pre-mRNA processing factors      100827067 SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N CRM1_C Motif Other DBs NCBI-GeneID:  100827067 NCBI-ProteinID:  XP_010232179 UniProt:  I1HQM0 LinkDB All DBs Position 2:complement(47387503..47405277) Genome browser AA seq 1257 aa AA seqDB search MEFQVDGALWPESRGGAAEAPPPPPPKERGEAPPPRFDSSRALRLLRDLGTNVTEDLVVL LPNLLSFLKHDDPAVVKQSIASGTNLFAAVLEEMALQINECGRVDAWLEQMWASMNQFKD AVCGMMHEPGPIASKLLALKFIETWILCLTPQSNSERMQSTEGKNRRFDASRLPKFHPSL DPVVLEADTNRAFTILVDIVQSAYAHRGSLLVGTINSLAAIGKNRPGYYDRALSVLFGFD PNLETSKGAHSASLRYSLKTAFIGFLRSPCQAMIESKDILVRRLRALSPGEATEQIIRQV EKMSRNIERTSRASKEELPAWEVPHGDLNRKNPAARSGDTLAMAEGIAKRARFDSSAGSN LLVQGMPDYSDMQIENDANVGHSSDPPSLLSTDVSPVEKMIEMIGALLAEGERGAESLGI LISSVESDVMADIVIETMKHLPEAPFPLDEVGISPPDALPTPGVSDSKRDPRRDPRRLDP RRTVAPAATSPIQVKVETTSVHQTDNFSNIPSPISGKVENHADYSGDLPENEDEEHTSSQ PDETIGKEISESLENGTEPETNFEVQAPVEARFNSSDVDGEKTNPLSQEAISNDEFDSMD LDVDPFSPVSKASTPEETNHELPLLPSHLELSDSEKLSLHKLTVRRIIDDYKNNSLNTRF SLLAHLVAQSTADDNIMELIQKHIIFHYHDQKGHELAMHVLYQLQCVNVADSPESSTPAS KHYEKFFISLARSLIDSLPASDKSFSKLLCDAPCLPESLFRLLESLCMSQGNSQQTKDSD GDRVTQGLGTVWSLILVRPPLRQACLDIVLKCAIHSQDEVRGKAVRLVSKKLYDLTYAAE KVEQFATESLLAVANKHGVETDVNFTTSKDCTTEFEVGSQETSVSGSQISDAGSSENGSA KTPLASPKQSAVSVSEAKRHSSLFFALCTKRPTLLGHLFNVYGMSPKVVKQCIHWHIPTL VRNLGSSCSEMLDIIHNPPEGSEELVIMILQTLTEESNPSAKLVVAVKHLYETKLKDASI LIPLLSSFPKEEVLPIFPRLVDLPPDKFQDALARILQGSAHTGPALTPAEVLIAIHDINP EKDQVPLRKVIDACTACFEQRTVFTQQVLEKSLNKLVDNVPVPLLFMRTVIQALDAFPAL VDFVMEILSRLVNKQIWKMPKLWVGFLKLAFQTQPRSFDVLLQLPPAQLEIALNKYPNLR THLSSFVNQRNAHGILPRQTLKVLGFINEPQQASVPFVPASLQTADTTSSLPGATLM NT seq 3774 nt NT seq  +upstreamnt  +downstreamnt atggaattccaggtggacggcgccctgtggccggagtcgcgaggcggcgcagccgaggcg ccgcccccaccgccaccgaaggagcgcggggaggccccacctccccgcttcgattcgtcg cgtgccctaagattgctgagagatcttggtacaaatgtaacagaagatttggttgtgctg ctgccaaatttgctgtcatttttgaaacacgacgatcctgcagttgttaagcaatctata gctagtgggacaaatttgtttgctgctgtattggaagagatggcacttcagattaacgag tgtggaagagtggatgcttggcttgaacagatgtgggcttcgatgaaccagttcaaagat gcagtctgtggtatgatgcacgagcctggtcctattgcatctaaactactcgctctaaag ttcattgaaacatggatcttgtgcctcacacctcaatccaacagtgagcgaatgcaatca actgaaggaaagaaccggaggtttgatgcttctcgattacctaaatttcatcctagcctt gatcctgttgttctggaagccgacacaaacagggctttcaccatcctggtggatattgtt caatcagcttatgctcatcgaggatccttgttagttggcaccattaattctcttgcagct attggaaagaataggccgggttactatgaccgtgcactgtcagtgttgtttggttttgac cctaatttggagacttcaaaaggggctcattctgcaagcctgagatattccctaaaaaca gcttttatagggtttttacgaagtccttgccaggcaatgattgagtccaaggacatacta gtaaggcggcttcgagcactgagcccaggtgaagcaacagaacagattattaggcaggta gagaagatgtctagaaatatagagcgcacttctcgtgccagcaaggaggagcttccagca tgggaggtgcctcatggagatcttaatcggaagaatcctgctgccagatcaggcgacact cttgctatggctgagggcatagctaagagagcaagatttgatagctctgcaggttcaaat ctgctagttcagggaatgcctgattattctgatatgcagattgaaaatgacgccaacgtg ggtcattcctctgatcccccatctctcttgagtaccgatgtgtctcctgttgagaagatg atcgaaatgataggtgcgttacttgctgaaggggaaagaggagctgaatcccttggtatt cttatatcatcagtagagtcagacgtcatggctgacattgtgatagagacaatgaagcat ctacccgaagctccttttccattagatgaagtaggcatttcaccacctgatgcacttcct acgcccggtgtttctgattctaagcgtgaccccagaagagatcctcgccgccttgatcca cggcgaacagttgcacctgctgctactagtcccatacaggtgaaggtggaaaccaccagt gtgcatcagacggataatttttcaaatataccttctcctatttctgggaaggttgaaaac cacgcagattattcaggagacctacccgaaaatgaagatgaggagcatacatcctctcag cctgatgaaacaattggcaaagagatatctgagtctttggaaaatggcacagaaccagag acaaactttgaagtgcaagcaccggtggaagccagatttaattcttctgatgttgatggg gagaagaccaatcccttgtctcaagaagctatttcgaacgacgaatttgatagtatggac ttggacgttgatcccttttcgccagtctccaaggcatcaacaccagaggagaccaatcat gagttgccacttcttccatctcatttggaattaagtgacagtgagaaactatcattgcac aaattaactgttaggaggataattgatgattacaagaacaacagccttaacacaagattt tccttgcttgctcatttggttgctcagagtacggctgatgataatattatggaattgatt cagaagcacattatcttccattatcatgaccaaaagggtcatgaactggctatgcatgtg ttgtatcagctgcaatgtgtcaatgttgctgattcaccagaaagttctactcctgcttct aaacattacgagaagttcttcatttcacttgcaaggtccttgatcgattcgctacctgct tcggataaatcttttagtaaacttctatgtgatgccccatgtttgcctgagtctcttttt agattactagagagtctttgcatgtcacaaggaaacagccaacaaacaaaggacagcgat ggtgaccgtgtcacccaaggcctgggaactgtatggagtctgattttagtgcggcctcca cttcggcaagcttgcttggatattgttctaaagtgtgccattcactcacaagatgaagtc agggggaaggcggttagattggtttcaaaaaagctctatgatctaacatatgcagcagaa aaggtcgagcagtttgccactgaaagtcttctggcagttgctaataagcatggtgtggag acagatgttaacttcacaacctcaaaggactgtacaaccgagtttgaagtaggcagccag gagacttcagttagtggctcccagatttcagatgcggggtcttctgaaaatggctctgcc aagacccctttagcttcaccaaaacaatcagcagtatctgtatctgaggccaaacgccat agctcattgttttttgcactttgcacaaagagacccactcttcttggacacctgttcaat gtttatggaatgtctccaaaagtcgtcaagcagtgtatccattggcatatacccaccctt gtaaggaatctgggatcctcatgttctgagatgctggacattattcataatccacctgaa ggcagtgaagaacttgttatcatgatactgcaaactctgactgaagaatcaaatccttca gccaagctggtagtggctgttaaacatctatatgagaccaagttaaaggatgcgtctatt ctcattccattgctatcctcatttccgaaggaagaggtgctgccgatatttccgagacta gttgatctcccacctgacaaattccaagatgcgcttgctcggatattgcagggatctgca cacactggtccagcattaactcctgctgaagttctgattgcaatccatgatattaatcca gaaaaggatcaagttcccctaaggaaggtcatagatgcttgcactgcttgctttgagcag cggacggtattcactcagcaagttttggagaagtcactgaataaattggttgacaatgta ccagttcctcttctatttatgagaacagttattcaagcgctcgatgctttccctgctttg gttgattttgtcatggaaatactctccagacttgttaataagcagatatggaaaatgcca aagctttgggttgggttcttaaaattggcattccagactcagccacgctcttttgatgtt ttgttacagctgcctccagcacaacttgaaattgccttgaacaagtatccgaatctacga acacatctttcttcttttgtcaatcaacggaacgcgcacggtatcttgcccagacagact ttgaaagtattgggcttcatcaatgaaccacagcaggcatcagtgccatttgtgcctgct tcattacaaacagcagacacgacttcctctcttcccggtgcaaccctaatgtga

DBGET integrated database retrieval system