Brachypodium distachyon (stiff brome): 100827102
Help
Entry
100827102 CDS
T01717
Name
(RefSeq) DNA mismatch repair protein MLH3
KO
K08739
DNA mismatch repair protein MLH3
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100827102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100827102
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
100827102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
MutL_C
HATPase_c
Motif
Other DBs
NCBI-GeneID:
100827102
NCBI-ProteinID:
XP_010238476
UniProt:
A0A2K2CST3
LinkDB
All DBs
Position
4:complement(42378147..42388103)
Genome browser
AA seq
1223 aa
AA seq
DB search
MSMQTIKRLPKSVHSSLRSSIVLSDLLRVVEELIYNSIDANAKKIDISLNVRSCYVKVED
DGCGITRDELVLLGEKYATSKFHDSMGDGESASRSFGLNGEALASLSDISVVEVRTKSRG
RPNSYCKIIKGSKCSHLGIDDQREAVGTTVVVRELFYNQPVRRKQMQSSHKRELQNVKKC
VLRVALIHPQISFRLLDIDSEDELLCTVPSSSSLPLISNSFGNDVSSCLHEISTSDQNWA
LSGHISGPTDVFSNKDFQYLYVNSRFVSRSPIHNILNNLAATFQSSMIRTNGENDVQSRK
RQKTDVYPAYLLNFFCPRSSYDLYYEPSKTVVEFKDWQSILFIFEDTIINYWKKHVPQPS
KGKAIDTSVPLKCDGKSNGSLLRHQNVQNKEDDVDLHKRSLQKSVVRESNVCMDAATGPK
DSHSFSFDMKPSSWHVCYPDQIIGASKHSDNVDSNDQIFGHTQARVPESISHQWLKGGSS
QLEDCDLSCANPTVWKKRRVEGIFHGHEYSCNFVKSKDVQTIGLSADDQESEIIGPEIDL
QDPCFGVLSTPNRITCDFMQNETNIKANMSVFDGFYAEFCKLNEDCLLNDVTKTIADVSC
PEMSHSSDGFYHEDRSTSSVLKRCSARKKLGNAVGYVEDLEANTVAHINFPEIQARWGSD
DIDRSSIEDTYFHFSHPFSLADTPHSHSHARTDLELHGESNKSFAYWSSENIDSDFQSSL
ERYISDSRRTSEGPKHFNNFDEETQSLNYFNHDNCFVGQFVSEDCQVPWKSKFDATLSYN
ISPEKSTSGCQLNVSSPQMAKDSALIEDQLCQQNFGFGWRSRLSKGSRSRSHSAPPFYRG
KRKFPGLNEHLTKLTAEHDKAIPINDKEDATPAPEDISQMSATQPIPETSSSDFSALNLS
LKGNVKMCEETYSDGLENSTAQITKWRDDSDQHTALKLPHVPSECFNDVLSISSGPLNLS
CSSLVPEYIDKKCFEEARVLFQLDKKFIPVISGEMLLLVDQHAADERIRLEELRGKVLSD
EDRGITYLDSEEDMALPETGFQLFQKYSEQIQKWGWIINGSSSSSQSFKKNMNILRRQAR
LVALTAVPCILGVDLTGKDLMDFIQQLDESDGSSTIPPAVLRILNFKACRGAIMFGDPLL
PSECCLIIEELKATSLCFQCAHGRPTTVPIVNVASLRDELARLGTLNGRSQTEPWHGLSH
HGPCLERAQTRLKQLRRLRRGGL
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgcagactataaaacgcttgccgaaaagtgttcatagctccttgcgctcaagc
attgttctgtctgacctacttagggtcgttgaggagttgatatataatagcattgatgca
aatgcgaaaaagattgacatctcactaaatgtcagatcatgttatgttaaagtggaagat
gatggttgtggtattactcgagatgaattggttctgttgggagaaaaatatgcaacatcc
aagttccatgattccatgggtgatggggaatctgcttctagaagttttggattaaatgga
gaggcactcgcatcactctctgatatctctgtggttgaagtcaggacgaaatctcgtggg
agaccaaattcatactgcaagataataaagggatccaaatgctcgcatctgggaatagat
gaccagagggaagctgttggcacaacagttgttgttcgggagcttttttacaaccaacca
gtcaggagaaaacaaatgcaatctagtcataaaagagaactgcagaatgtgaagaagtgt
gtcctgcgagttgcacttattcatccacagatttcattcagacttcttgacattgacagc
gaagatgagttgctatgtacagttccttcatcatcctctttgcctcttatatcaaacagt
tttgggaatgatgtttccagttgtcttcatgaaatatctacctcagatcagaactgggct
ctttcagggcacatatctggaccaaccgatgtcttctctaataaggatttccagtacttg
tatgtcaactcaagattcgtcagtagaagcccaatacataatattctgaataatctggca
gctactttccagtcttccatgataaggacgaatggagaaaacgatgttcagagccggaag
aggcagaagactgatgtctaccctgcatatctgctaaacttcttctgccctagatctagc
tacgatctatattatgagccttcaaaaactgttgtggagttcaaggactggcaaagtata
ttgtttatctttgaagatactatcataaactactggaagaagcatgtaccacaaccatcc
aaaggcaaagcgattgatacctctgtgcctctgaaatgtgatgggaagtccaatgggagc
ctcctaaggcatcagaatgtgcagaacaaggaagacgatgttgacttacacaaacgctct
ctgcagaagagtgtggtcagagaaagcaatgtttgtatggatgcagcaacaggacctaaa
gactcacattccttttctttcgatatgaagccatcctcatggcatgtctgctaccctgac
cagatcatcggtgcatccaaacactctgacaatgttgatagtaatgatcagatatttggg
catacacaagcacgtgttcctgaaagcatcagtcatcagtggttaaagggtggttcttcc
cagttagaagactgtgatctttcatgtgctaacccaactgtttggaaaaagcgacgagtg
gaaggtatattccatgggcatgaatattcctgtaattttgtcaagtccaaagatgtacaa
acaataggcctttcagctgatgatcaagagtctgagataattggtccagaaattgatctc
caagacccttgctttggggttctcagtacaccaaacagaattacctgtgattttatgcaa
aacgaaaccaatataaaggcaaacatgtctgtctttgatgggttctatgctgaattttgt
aaactaaatgaggattgcctactcaatgacgttacgaagacaatagctgatgtttcttgc
cctgaaatgtcgcattccagtgatggattctatcatgaagatcgtagcacctctagtgtc
ctgaaaaggtgcagcgcaagaaagaagttagggaatgcagtgggatatgttgaagacctt
gaggctaatacagttgcccatataaacttccctgaaatacaagcaaggtggggaagtgac
gacattgataggtcctccatcgaagatacatacttccatttctctcatccattttcattg
gctgatacacctcatagtcacagtcatgcaaggactgacttggaattgcacggggaatca
aataagagctttgcttattggagttctgaaaatattgacagtgattttcaatcttctttg
gaaagatatatcagtgattcacgaagaacaagtgaaggacctaaacattttaataacttt
gatgaagaaactcagtcgcttaattacttcaatcatgataattgttttgtcggccagttt
gtttctgaagattgtcaggtaccctggaaatcaaaatttgatgcaacattatcatacaat
atttctcccgagaaaagtacttctggttgccagttgaatgtttcttctccccaaatggca
aaagacagtgcgcttattgaagatcaactgtgtcaacaaaattttggatttggttggaga
tccaggctttccaagggtagtagatctaggagtcattctgctccaccattttacagaggc
aaacgaaaatttcctggattgaatgagcatctgaccaaattgacagcagaacatgataaa
gctatcccgattaatgacaaagaagatgccacacctgcacccgaggatatctcacaaatg
agtgcaacccagcctattcctgagactagtagcagtgatttttctgccctaaatctcagc
ttgaaaggaaatgtgaaaatgtgtgaagagacatattctgatgggcttgaaaactctact
gcgcaaataactaaatggcgagatgactcggaccagcatacagctttgaagttgccacat
gttccttctgaatgcttcaacgacgtacttagcatttcttccgggcccttaaatctctct
tgtagctcgctagttccagaatatattgataaaaagtgctttgaggaggcaagagttctg
tttcagctagataagaaatttattcctgtcatatctggggagatgctgctacttgttgat
cagcatgcagctgatgaaaggatacgcttggaggagcttcgtggcaaggttttatcagat
gaagaccgaggaatcacttacttggactcagaggaggatatggctctccctgagactgga
tttcaattgttccagaagtacagtgagcagattcagaaatggggctggatcatcaacggt
tctagcagttcttctcaatcattcaaaaagaacatgaacattctgaggagacaagcccgt
ctagttgctcttactgctgttccatgtattttgggcgtcgatttaacaggaaaagatctt
atggactttattcagcagctcgatgagagtgatgggtcatcaactattcccccagcagtt
ctccgtattcttaatttcaaagcttgcagaggagcaattatgtttggcgatcccttgcta
ccgtccgagtgctgtctgatcatcgaagaactgaaagcaacatctctgtgcttccagtgt
gcacatgggcgtccgaccacagtgcccatcgtgaacgttgcatccctccgcgacgagctc
gcgaggcttgggacgctgaacgggaggagtcagacggagccctggcatggcctgtcgcac
cacggaccctgccttgagcgcgcccagactcgccttaaacagctgaggaggctacgccgt
ggcggcctgtag
DBGET
integrated database retrieval system
