KEGG   Brachypodium distachyon (stiff brome): 100827231
Entry
100827231         CDS       T01717                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform
  KO
K11584  serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100827231
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:bdi01009]
    100827231
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bdi03019]
    100827231
   03036 Chromosome and associated proteins [BR:bdi03036]
    100827231
Protein phosphatases and associated proteins [BR:bdi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     100827231
Messenger RNA biogenesis [BR:bdi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     100827231
Chromosome and associated proteins [BR:bdi03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     100827231
SSDB
Motif
Pfam: B56 MSC
Other DBs
NCBI-GeneID: 100827231
NCBI-ProteinID: XP_003580003
UniProt: I1IZ05
LinkDB
Position
5:complement(17422948..17426579)
AA seq 507 aa
MIKQILGKLPKKTVKAGDSRDAAMGNGYESSNSNSVVRSVEPAGHKRAGNGEYLAPAGSG
PSPAMNGTVVYHSSEPLPAFKDVPASEKQNLFVKKVNLCCAVYDFTDPTKNLKEKEMKRQ
TLMELVDYVTSANGKFSEVIMLEIGKMVAINLFRSSRPNPRENKAIEGVDLEEDEPLMDP
AWSHLQIVYEVFLRFVASQETDAKLAKRYIDHSFILRLLDLFDSEDLRERDYLKTILHRI
YGKFMVHRPFIRKAINNIFYRFIFETERHNGVAELLEILGSIINGFALPLKEEHKLFLIR
ALIPLHKPKCVAMYHQQLSYSITQFVEKDCKLADTVIRGLLKYWPITNSSKEVMFLSELE
EVLEATQLAEFQRCMVPLFRQIAGSMNSSHFQVAERALFLWNNDHIESLIKQNYKVILPI
IFPALERNARGHWNQAVRSLTLNVRKIFSDHDPAFFGECMEKFNDDELKQEESSSKREAL
WKRLEEMVASKSNGNIPLGITNGKSSQ
NT seq 1524 nt   +upstreamnt  +downstreamnt
atgattaaacagatccttggcaagctgccgaagaagacggtgaaggccggtgatagccgg
gacgctgctatggggaacggctatgagtcctcgaattcgaacagcgttgtgagaagtgtg
gagcctgctgggcataagagagcaggaaatggggaatacctggcaccagctggctccggt
cctagtccggcgatgaatgggactgtggtgtatcactccagtgagccgctgccagcgttc
aaggacgtgccagcctcggagaagcagaatttatttgtcaaaaaggtgaacctgtgctgt
gccgtgtatgatttcacagatccaacgaaaaacttgaaggagaaagagatgaagcgccag
acgcttatggagcttgttgattacgtcacctctgcaaatggcaagttctcagaagtcatt
atgttggagatcggcaagatggtggcaattaacttgttccggagctcgagacccaatcct
cgtgagaacaaggccatcgaaggagttgatctggaggaagatgagcctctcatggaccca
gcttggtcacacttgcagattgtttacgaggttttcttgagatttgtagcatcacaggag
acagatgcaaagctggccaagagatacatagatcattccttcattctcaggttactagat
ctttttgactcagaagatctcagggagagggattatttgaagacaatactccatcgaata
tatggtaaattcatggtgcatcgcccattcatcaggaaagcaataaacaacattttctac
aggtttatatttgaaacagaaaggcataatggcgttgcagaattgctggagatcttggga
agtataatcaatggatttgccctgccacttaaagaagagcacaaattgttccttattcgt
gcgctgatcccactccataagccaaagtgtgtggcaatgtaccaccagcagctttcgtat
tccatcacacaatttgttgagaaggactgcaaacttgctgacactgttattaggggctta
ctgaagtattggcctataacaaatagttcaaaggaggtgatgttcttgagtgagctagaa
gaggttttagaggcaacacagcttgcagagttccaaagatgcatggttccgctcttccgt
cagattgctggtagcatgaacagctcgcacttccaggtggcagagcgagcactatttctg
tggaacaatgaccacatcgagagcttaattaagcagaattacaaggtgatattacccatc
atttttcctgcgctcgagaggaatgcccggggtcactggaaccaggctgttcggagcctg
acattgaatgtacgcaagatcttctctgatcatgatcctgcatttttcggggagtgcatg
gagaagttcaacgacgatgaactgaagcaagaagaatccagctcgaagcgagaagcccta
tggaagcgcctggaagaaatggtggcctcaaaatccaacggaaacatacccttgggtata
accaacggcaaatccagtcaatag

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