Brachypodium distachyon (stiff brome): 100827231
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Entry
100827231 CDS
T01717
Name
(RefSeq) serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03015
mRNA surveillance pathway
bdi04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100827231
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100827231
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bdi01009
]
100827231
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100827231
03036 Chromosome and associated proteins [BR:
bdi03036
]
100827231
Protein phosphatases and associated proteins [BR:
bdi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
100827231
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
100827231
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
100827231
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B56
MSC
DUF349
Motif
Other DBs
NCBI-GeneID:
100827231
NCBI-ProteinID:
XP_003580003
UniProt:
I1IZ05
LinkDB
All DBs
Position
5
Genome browser
AA seq
507 aa
AA seq
DB search
MIKQILGKLPKKTVKAGDSRDAAMGNGYESSNSNSVVRSVEPAGHKRAGNGEYLAPAGSG
PSPAMNGTVVYHSSEPLPAFKDVPASEKQNLFVKKVNLCCAVYDFTDPTKNLKEKEMKRQ
TLMELVDYVTSANGKFSEVIMLEIGKMVAINLFRSSRPNPRENKAIEGVDLEEDEPLMDP
AWSHLQIVYEVFLRFVASQETDAKLAKRYIDHSFILRLLDLFDSEDLRERDYLKTILHRI
YGKFMVHRPFIRKAINNIFYRFIFETERHNGVAELLEILGSIINGFALPLKEEHKLFLIR
ALIPLHKPKCVAMYHQQLSYSITQFVEKDCKLADTVIRGLLKYWPITNSSKEVMFLSELE
EVLEATQLAEFQRCMVPLFRQIAGSMNSSHFQVAERALFLWNNDHIESLIKQNYKVILPI
IFPALERNARGHWNQAVRSLTLNVRKIFSDHDPAFFGECMEKFNDDELKQEESSSKREAL
WKRLEEMVASKSNGNIPLGITNGKSSQ
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacagatccttggcaagctgccgaagaagacggtgaaggccggtgatagccgg
gacgctgctatggggaacggctatgagtcctcgaattcgaacagcgttgtgagaagtgtg
gagcctgctgggcataagagagcaggaaatggggaatacctggcaccagctggctccggt
cctagtccggcgatgaatgggactgtggtgtatcactccagtgagccgctgccagcgttc
aaggacgtgccagcctcggagaagcagaatttatttgtcaaaaaggtgaacctgtgctgt
gccgtgtatgatttcacagatccaacgaaaaacttgaaggagaaagagatgaagcgccag
acgcttatggagcttgttgattacgtcacctctgcaaatggcaagttctcagaagtcatt
atgttggagatcggcaagatggtggcaattaacttgttccggagctcgagacccaatcct
cgtgagaacaaggccatcgaaggagttgatctggaggaagatgagcctctcatggaccca
gcttggtcacacttgcagattgtttacgaggttttcttgagatttgtagcatcacaggag
acagatgcaaagctggccaagagatacatagatcattccttcattctcaggttactagat
ctttttgactcagaagatctcagggagagggattatttgaagacaatactccatcgaata
tatggtaaattcatggtgcatcgcccattcatcaggaaagcaataaacaacattttctac
aggtttatatttgaaacagaaaggcataatggcgttgcagaattgctggagatcttggga
agtataatcaatggatttgccctgccacttaaagaagagcacaaattgttccttattcgt
gcgctgatcccactccataagccaaagtgtgtggcaatgtaccaccagcagctttcgtat
tccatcacacaatttgttgagaaggactgcaaacttgctgacactgttattaggggctta
ctgaagtattggcctataacaaatagttcaaaggaggtgatgttcttgagtgagctagaa
gaggttttagaggcaacacagcttgcagagttccaaagatgcatggttccgctcttccgt
cagattgctggtagcatgaacagctcgcacttccaggtggcagagcgagcactatttctg
tggaacaatgaccacatcgagagcttaattaagcagaattacaaggtgatattacccatc
atttttcctgcgctcgagaggaatgcccggggtcactggaaccaggctgttcggagcctg
acattgaatgtacgcaagatcttctctgatcatgatcctgcatttttcggggagtgcatg
gagaagttcaacgacgatgaactgaagcaagaagaatccagctcgaagcgagaagcccta
tggaagcgcctggaagaaatggtggcctcaaaatccaacggaaacatacccttgggtata
accaacggcaaatccagtcaatag
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