Brachypodium distachyon (stiff brome): 100827242
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Entry
100827242 CDS
T01717
Name
(RefSeq) E3 ubiquitin-protein ligase AIRP2
KO
K25840
E3 ubiquitin-protein ligase AIRP2 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100827242
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100827242
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100827242
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_2
zf-RING_5
Prok-RING_4
zf-rbx1
zf-RING_UBOX
zf-RING_4
RING_ZNF598
zf-C3HC4_4
zf-RING_10
zf-UDP
zf-RING_14
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
100827242
NCBI-ProteinID:
XP_003580834
UniProt:
I1J3E9
LinkDB
All DBs
Position
5:27558789..27561382
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AA seq
256 aa
AA seq
DB search
MVACCSMRRSFRDSLKVLEADIQHANTLASDFSRDYDGACLQMRMSYSPAAHFFLFLVQW
TDCSLAGALGLLRVLIYKVYVDGTTTMSTHERKASIREFYAVIFPSLMQLHNGISDVDDR
RQKAVCTERYRRRDEDQSKRQVSEIDSERDEECGICMELNSKVVLPNCSHAMCIKCYRQW
RSRSQSCPFCRDNLKRVNSGDLWVLTDHGDAVDMATVTRENIRRLFTYIEKLPLITLDNI
FDAYDSHRMFLVLGCG
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggtggcttgctgctccatgcggaggtcgttcagggactcgctcaaggtgctggaggcc
gacatccagcacgccaacaccctggcgtcggatttctcgagggattacgacggggcgtgc
ctgcagatgcggatgtcctacagccccgccgcgcacttcttcctcttcctcgtgcagtgg
accgactgcagcctcgccggcgcgctcggcctgcttagggttctgatttacaaggtttat
gtcgatggaaccaccaccatgtccactcacgagaggaaggctagcatcagggagttttat
gctgtcatatttccctccctcatgcaactgcacaacgggatcagcgacgtcgacgaccgg
aggcagaaggcggtctgcacggagagatacaggaggagggatgaggatcagagcaagagg
caggtctcggagattgattccgagagagacgaagagtgtgggatctgcatggagctgaac
agcaaggttgtgctgcccaactgcagccatgctatgtgcatcaagtgctaccgtcaatgg
cgttcaagatctcaatcgtgccccttctgccgtgacaacctcaaaagagtaaattctgga
gatctatgggtgctcactgatcacggagacgcggttgacatggcgacagtgactagggag
aacatcaggcgcttgttcacgtatatcgagaagctgcctctcattacgctggataacatc
ttcgatgcctatgattctcataggatgttcctcgtcctaggatgtggctga
DBGET
integrated database retrieval system
