Brachypodium distachyon (stiff brome): 100827302
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Entry
100827302 CDS
T01717
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100827302
04121 Ubiquitin system [BR:
bdi04121
]
100827302
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100827302
Membrane trafficking [BR:
bdi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100827302
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100827302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
Zn_ribbon_8
zf-Nse
zf-RING_Vps41
PEX14-like_2nd
Zf_IFT144_1st
VPS18_RING_C
Anti-TRAP
HypA
Motif
Other DBs
NCBI-GeneID:
100827302
NCBI-ProteinID:
XP_003557291
UniProt:
I1H250
LinkDB
All DBs
Position
1:50875856..50879089
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AA seq
338 aa
AA seq
DB search
MSSSSSAAAQQHQRYYCHQCDRTISIPRPASLDADVLCPHCSGGFVEELLQEQPNPSPPT
PPPPTHPFFPFSSASFLDLRHPSDLAGVLGPQSPSAPRANHFDVTDFLHGHLGGILSGGA
TIQIVLEGSSAGPFGLSGLAGAGAGGINLGDYFMGSGLEQLIQQLAENDPNRYGTPPAAK
SAVAALPDVAVSATMMAADGGAQCAVCMDDFELGASAKQLPCKHVFHKDCILPWLDLHSS
CPVCRHELPTDEPDHDRRQGDQRAAAASAAAAAAAAAEASPGTPSPRVAERRFRISLPWP
LRAALGGQVESSDPSGQDASGSNNNDASGAPRSYDDLD
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcctcgtcggcggcggcgcagcagcaccagcgctactactgccaccagtgc
gaccgcaccatctccatcccgcgtcccgcctccctcgatgccgacgtcctctgcccccac
tgttcgggcggtttcgtcgaagagctcctccaggaacagccaaaccctagccctccaacc
ccgccgccgccaacccaccccttcttccccttctcctccgccagcttcctcgacctccgc
cacccaagcgacctcgccggcgtcctcggcccccaatccccctccgctccccgcgccaac
cacttcgacgtcaccgacttcctccatggccacctcggcggcatcctctccggcggggcc
accatccagatcgtcctcgagggctcctccgccggacccttcggcctctccggcctcgcc
ggcgccggcgccggcgggatcaacctcggcgactacttcatgggatccggcctcgagcag
cttatccagcagcttgccgagaacgatcccaaccgctatggcaccccgcccgccgccaag
tccgccgtcgctgccctgcctgacgttgctgtgtccgccaccatgatggctgccgatgga
ggcgcccagtgcgctgtctgcatggacgacttcgagctcggggcctctgccaagcagctc
ccctgcaagcatgttttccacaaggactgtatcctgccctggctcgacctgcacagttcc
tgccctgtctgccgtcacgagctgcccactgatgaacctgatcatgaccgccgccaggga
gaccagcgcgctgctgctgcctctgccgcagcggcagcagcggcagcggctgaggcatcg
cctggcaccccttctcccagggtggctgagaggaggttcaggatatctctgccttggcct
ctcagggccgccttgggtggccaggtcgagagcagcgatccaagcggccaggatgctagt
ggtagcaacaacaacgatgcaagtggtgcccctcgttcctatgatgatctggactga
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