Brachypodium distachyon (stiff brome): 100827350
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Entry
100827350 CDS
T01717
Name
(RefSeq) pre-mRNA-splicing factor 18
KO
K12817
pre-mRNA-splicing factor 18
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100827350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100827350
Spliceosome [BR:
bdi03041
]
Complex C
Other components
Step II factors
100827350
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
PolyG_pol
LAGLIDADG_2
Motif
Other DBs
NCBI-GeneID:
100827350
NCBI-ProteinID:
XP_003562865
UniProt:
A0A0Q3KWS7
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Position
1:19324191..19327504
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AA seq
429 aa
AA seq
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MDLLKRELEKKRKAATADFGGKNFVRRSELEEKQLQKRRQIPGKAPSVPSPNSAASDHNN
SNADPTQAGGANPNPSSSSAAAAVPPALAGKKAVPEDALHSEERRIDELVLPRNEVMRRL
RVLREPVTLFGEDDADRLDRLKLVLKSGAIDDIDDLEMTEGQTNDFLRDMIELRMRQKAG
RDTYVKGKGKRGGGDGGEGGAQGEGADDGDGDARRSGDDADADKDSKRMKTKFEELCDED
KILVFFKRLLNEWNQELDDMTELEKRTAKGKSMFATFKQCARYLSPLFEFCRKKVLPDDI
RKALLFIVDCCMKRDYLQAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIM
NDETTRKYLQSIKRLMTLCQRRYPALPSKSVEFNSLANGSDLQALLSEEKDPGKAPSEER
LRLMPASKE
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggatctcctgaagcgggagctggagaagaagcggaaggcggcgacggctgacttcggc
ggcaagaacttcgtccggcggtcggagctggaggagaagcagctgcagaagcgacgccag
atccccggcaaggctccgtccgtgccctcccccaactccgccgcctccgaccataacaac
tccaacgccgaccctacccaggccgggggcgcgaaccctaaccctagctcctcctccgcc
gccgcggccgtcccacccgccctcgcggggaagaaggccgtgccggaggatgcactccac
tccgaggagcgccgcatcgatgagctcgtcctcccgcggaacgaggtgatgcggcgcctt
cgcgtgcttcgcgagcctgtcacgttattcggggaggacgacgccgaccgcctcgatcgc
ctcaagctcgtgctcaagtccggagcaatcgacgatatcgacgaccttgagatgaccgag
gggcagaccaacgacttcctccgtgacatgattgagctccgcatgcggcagaaggctggt
cgagatacctatgtcaagggcaaggggaaacgtggcggcggtgatggtggcgagggtggt
gcccagggagaaggcgctgatgatggtgatggcgacgcccggagaagtggggatgatgct
gatgcagacaaggactccaagcgaatgaagaccaagtttgaggagctttgtgacgaagac
aagatcttagtgttcttcaagaggctgctcaacgagtggaaccaggagctggatgatatg
actgagctggagaagcggacggcaaaagggaagtcgatgtttgcaacattcaagcagtgt
gcgcgttatctcagtcccctgttcgagttctgcaggaagaaggttcttccggatgacatc
cgtaaagcattgctctttattgttgactgctgcatgaagcgtgattatttgcaagcaatg
gaccaatacatcaagctggccattggcaatgcgccgtggcctattggagtcactatggtt
ggtatccacgagcgttctgcccgtgagaagatctacacaaatagtgtggctcatattatg
aatgatgagaccactcgaaagtaccttcagtcgatcaagaggcttatgaccctttgccag
cgccgttatcctgctctgccctccaaatcagtggagttcaacagcctggcaaatgggagt
gacttgcaggctcttctatcggaggagaaggatcctggaaaagctccttctgaggaaagg
ctcaggctcatgccagcatcaaaagaatga
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