Brachypodium distachyon (stiff brome): 100827537
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Entry
100827537 CDS
T01717
Name
(RefSeq) chaperonin 60 subunit beta 4, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100827537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100827537
03110 Chaperones and folding catalysts [BR:
bdi03110
]
100827537
03029 Mitochondrial biogenesis [BR:
bdi03029
]
100827537
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bdi04147
]
100827537
Enzymes [BR:
bdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
100827537
Messenger RNA biogenesis [BR:
bdi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
100827537
Chaperones and folding catalysts [BR:
bdi03110
]
Heat shock proteins
HSP60 / Chaperonin
100827537
Mitochondrial biogenesis [BR:
bdi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
100827537
Exosome [BR:
bdi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100827537
Exosomal proteins of other body fluids (saliva and urine)
100827537
Exosomal proteins of breast cancer cells
100827537
Exosomal proteins of colorectal cancer cells
100827537
Exosomal proteins of bladder cancer cells
100827537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
100827537
NCBI-ProteinID:
XP_003579836
UniProt:
I1IY54
LinkDB
All DBs
Position
5:14938422..14943170
Genome browser
AA seq
586 aa
AA seq
DB search
MSRMPPPPPPLSSKPPTLPFSPKKPPPMPVYKDLHFNHDLSATKKLQAGVDLVARLVGVT
LGPKGRNVVLSNKYGPPKIVNDGETVLKEIELEDPLENLGVKLVRQAGARTNDIAGDGCT
TSIILAQGLIAEGMKVLAAGINPVQIARGIGKTSDALVSELRSMSREIEDHEIAHVAAVS
AGNDYAVGNMISDAFKRVGRKGMVRIENGRGTENSLEIVEGMQFERGYLSPYFVTNHANM
SVEFTDCKILLVDKIITDPRELLKVCFSAVKEDFPLVIIAEDVEEEALATLTRNKLSGMI
KVAAIEALSFGEQKTQCLEDIAIMTGGTVVRDDMGYTLEEAGKEVLGSASKVVIKKDSTL
IVTDGSTLHAVEKRVAQIKGQIENSKERYQKKILGERIARLCGAIAIIQVGAQTVIEMKD
KKLRIEDALNATMAAIDEGVVVGGGCSLLRLSKKIDIIKESLDNIEQKIGADIFKHALSY
PTILIANNAGMSGKFVIQKVLSNENTNYGYNAANDCYEDLMAAGILDPSKVVRCCIEHAA
VVARSFLTSDVVVVEAKESKPVRIRPPMPPRNLIPPIPASVSSIRV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggatgccccctccgccgcctcccctctccagcaagccccccaccctccccttc
tcccccaagaagccgccgccgatgcccgtgtacaaggacctgcatttcaaccacgacctc
tccgccaccaagaagttacaggctggtgtggacttggtggcgcggctggtgggtgtgacc
ctgggacccaaggggaggaatgtggtgctcagcaacaagtatggccctcccaagatcgtc
aacgacggggagacggtccttaaggagatcgaattggaggacccgttggaaaatctagga
gttaaattggtcagacaggctggcgccaggacgaatgatattgctggtgatggctgtaca
acttctattatccttgctcaaggcctgattgctgaaggaatgaaggttcttgctgctgga
attaatcctgtccagattgcacgtggcattgggaagacttctgatgctttggtttccgaa
ctcaggtcgatgtcacgggagattgaagaccacgaaatagcacatgtggctgccgttagc
gcaggaaatgactatgctgttggaaacatgatttctgatgcttttaaaagagtaggcagg
aaaggcatggttagaattgaaaacgggagaggcaccgagaacagtttagagatcgttgaa
ggaatgcaatttgaacgtggttacctctcaccttactttgtaactaatcatgcaaatatg
tccgtggagttcactgactgtaagatccttttggttgacaagataattactgatccaagg
gagcttttaaaagtatgctttagtgctgtaaaagaagattttccattggtaataattgcc
gaggatgtagaagaagaagcattggctactttgaccagaaacaagctatcagggatgatc
aaagtggcagcaatagaggccctttcttttggagaacagaaaactcaatgcttggaggac
atcgcaatcatgacaggaggtacagttgtgagagatgacatgggatacacactagaagag
gcagggaaagaggttttaggttctgcatctaaagtggtgatcaagaaagattcaacacta
attgttacggatggaagcacccttcatgcagttgagaaaagggttgctcaaataaaaggc
caaattgagaactcaaaggagaggtaccagaagaagatactgggtgagaggattgcaagg
ttatgtggtgcaattgcaatcattcaggttggtgctcaaacagtcattgagatgaaagat
aagaagctgagaattgaagatgcccttaatgcaaccatggcagctattgatgaaggtgtc
gtagttggaggtggatgtagcctattgagattatccaagaagattgacataatcaaggaa
tcattggataatatagagcagaagattggcgctgacatcttcaaacatgctttgagctac
cctaccatactaatagcaaacaatgctgggatgagtggcaagtttgtcatccaaaaggtg
ctatcaaatgaaaatacaaattatggctacaatgctgccaacgactgctatgaggacttg
atggctgctggaatattggacccatcaaaggttgtgaggtgttgcatagagcatgctgcc
gtggttgccaggtcttttctcacctccgatgtagtggttgtcgaggcgaaagagagcaaa
ccagttcgcataaggcccccaatgccacctagaaatttgatccccccaattcctgcatca
gtttcaagtattcgggtgtag
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