Brachypodium distachyon (stiff brome): 100827543
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Entry
100827543 CDS
T01717
Name
(RefSeq) uncharacterized protein LOC100827543
KO
K16573
gamma-tubulin complex component 6
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bdi03036
]
100827543
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bdi04812
]
100827543
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
100827543
Cytoskeleton proteins [BR:
bdi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
100827543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP_C_terminal
GCP_N_terminal
Motif
Other DBs
NCBI-GeneID:
100827543
NCBI-ProteinID:
XP_003580341
UniProt:
A0A0Q3E865
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All DBs
Position
5:complement(21825697..21835441)
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AA seq
1137 aa
AA seq
DB search
MLAPPPQDADLVRLALHALHGVKSSLDEIKELSVLFSLAPADRTSHRVANVWSRSSSTAS
VAHILNSICSSGLAVYFLCKFVHFYLFQSRETNCGSRERCGLDVCNDKDTDPPPPYSLVN
QAFAAAVEKVLEGYFCSLNTLPPSIKLRRSEGQPDRPSIIPDRTSHKSSSEATLLEVYLH
TEELRRHIKSLGNICFPKFAGLTLCQEGLTTDANLEFENFPRGTDLLSYLYVRLRDADPV
HYALLKYLFTRSCEPYCNFIKLWIYRASVEDPYEEYLITQTENKQIQGCSSGALDDFTVL
SFKGMNHVSVPCFLQDICNPLLRTGQQLQVLMKLVKSCNLCTTEGDAQASSKTIHLEEIL
PWFDTPIDSSVNSFTFSKSRAEAVICQRDAMYKSMVEKLHHFFSNVEIIPFGPASNSLYT
SKSPLDRAVSDMELLHIDTHALPTCNMAGDDKENDASSTSQESSDKLDPLESSDCSSSYS
SMDEIEVESGIACGNLSSSMLSSYHASTGEANFSSETKYMCSYQSSSFHNDRNTSSPNND
YHRNGDLSCNNVPMISQNMEHNVMPDTLELDYQYSKFWPFGKLPKNTFKSCPGKMCLVDE
FLYTDNESAVEQVSHDVVYPSHNENSWKINRSWNTSVPYNLSTNPILKNAASHQMESDLQ
GKRKNRALTSFVFESVTNPCEVYCGRSTSCLVECEDGATKGVQTAAQFYEETDCSSKLLE
AKTGSQGYLALTGEMAARDNIQENVCGGALWEKLLEYTAKTTEKIVRDSNAASDMPLDIA
IDKCIIQEVLLQYEYVSSLTMKLLEEGFDLCGHLLALRRYHFMEQADWADSFIVSIYHKK
WFFVKSEQRRAEIKRLLDLALQRSSCDTDPYKERLFIYMKEQAGISFAGSECGLDMLDDI
LLGYRVDWPVNIVITEEVLGKYAEIFCYLVQVRFAVFSLTEVWRFLKELTQLISRSRHSR
PDILKELNSVMKVRHQVYHFLSTLQQYHHCNLSDISWRRFQHSLKHQVKDMLDVEYVHMC
YVTDALHICFLSSETKPVATIIRSILQQALEFRSCFKSLDDLSESTVNQLNLHSLINFSQ
VEVIRMKFESNIKDLYILHSKSSKYEELGLSRFWGYLNYNEYHSLKISKDVGCFYFL
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgctagcgcctccaccgcaggatgctgatttggttcgtctggctctgcatgcactgcat
ggtgtcaaatcatcgttagatgagatcaaggagctttccgtgctgttctccttagctccg
gcagacaggacttctcatcgtgttgcaaatgtgtggtcacgttcatccagcactgcttct
gtagcgcatattctcaattctatatgttcttcaggtcttgcggtttacttcctgtgcaag
tttgtgcacttttatcttttccaaagtcgagaaacaaattgcggaagtagagaaaggtgt
ggacttgatgtttgtaatgacaaagacaccgatcctcctcctccttatagtctagtgaac
caagcatttgctgcagcagttgaaaaagttctagaaggctatttctgttccttgaatact
ttaccaccttcaattaagctgaggcgttcagagggacaacctgatagaccttccatcatc
ccagacagaactagtcataaatctagttctgaagccactcttctggaagtttatctccac
accgaggagttaagaaggcatattaagtccctcggaaatatttgttttcctaagtttgca
ggtcttacattatgccaggagggtttgactactgatgctaacttggagtttgagaacttc
ccaaggggcactgatttgctttcttatttgtatgtccgcctccgtgatgctgatccagtt
cactatgctcttttgaaatatcttttcactcgttcctgtgaaccatactgtaatttcatt
aagttatggatttaccgagctagtgttgaggacccttatgaggaatatctcataacacaa
actgagaataagcaaattcaaggatgttcttctggcgcactagatgatttcactgtattg
tccttcaagggaatgaatcatgtatctgttccatgttttctgcaagatatatgcaatcct
cttttgcgcactgggcagcagcttcaagtgctcatgaagctcgtaaaatcatgcaatctt
tgtactactgaaggagatgctcaggcctctagtaaaaccattcatctagaagaaattctc
ccttggttcgatacgcccattgactcctcagtgaattcatttactttctcaaaaagcagg
gcagaagcagtaatatgtcaaagagatgccatgtacaagtcaatggtagagaagctccat
cattttttctcaaatgttgagataattccttttggtcctgcgtcaaactccctatataca
agcaaaagccctctcgatagagcagtttcagatatggagctattacacatcgacacccat
gctctgccaacttgcaatatggctggagatgacaaagagaatgatgcttcttcaacatca
caagaatcttcagataaactggatccactggaatcttcagattgctcttcttcttatagt
tctatggacgaaattgaagttgagagtggcatcgcttgtggtaatttgtctagttccatg
ctctcatcataccatgcgagtacaggcgaagcaaatttctcctcagaaacaaaatatatg
tgttcatatcaaagtagctcttttcacaatgacagaaatacttcaagccctaacaatgat
taccacagaaatggcgatttgagttgcaacaatgtccccatgatctcacagaatatggaa
cataatgtgatgcctgatactctggaactagattaccagtatagtaaattttggccattt
ggcaaacttccgaagaacacatttaaaagttgccctggaaaaatgtgtttggttgacgag
ttcctatatactgacaatgaaagtgcagtagagcaagtatcacatgatgtagtttatcca
tcacacaacgagaactcctggaagataaatcggtcatggaatactagtgttccttacaat
ctcagcaccaaccccatactgaagaatgcagctagtcatcagatggagagtgacttgcaa
gggaaaaggaagaaccgagcacttaccagctttgtttttgaatcagtcacaaatccatgt
gaagtatactgtggaaggagcacatcctgcctagttgagtgtgaagacggagctacaaaa
ggtgtgcagaccgctgctcagttttatgaagagacagattgttctagcaagcttcttgaa
gctaaaacaggaagtcagggataccttgctttgacaggagaaatggcagcaagagataat
attcaggaaaatgtttgcggtggagcattatgggagaaattgttagaatatactgctaaa
acaacagaaaaaattgttagagatagcaatgcagcatctgatatgccacttgacatagct
attgacaagtgcattatacaagaagttctgcttcaatatgaatatgtcagcagcctcaca
atgaagttgcttgaggagggttttgatctttgtggacatctattagcactgcgacgatac
cattttatggaacaagccgactgggcagattcttttattgtttccatttatcataagaaa
tggttctttgttaagtctgagcagagaagagcagagatcaaaaggcttcttgacttggcc
ttgcagaggtcttcatgtgatactgacccttataaggaaagactgttcatatacatgaaa
gaacaagcaggcatttcttttgctggctctgaatgtggtcttgatatgctggatgacatc
ttgttgggttatagagtcgattggccagtgaatattgtcattacagaggaagtacttgga
aaatatgctgaaatattctgttatcttgttcaagtcaggtttgcggtcttctcactaact
gaagtatggcggtttctaaaggagttaacacagttaatcagtcgctcgagacacagtaga
ccagatatattgaaggaactaaactctgtaatgaaagttagacatcaagtttatcatttt
ctatcgacgctacagcagtaccaccattgcaatttgtctgatatatcatggcgtcgtttt
caacattcccttaaacatcaggtgaaagatatgctggatgtcgagtatgtgcatatgtgt
tatgttacggatgcacttcacatatgtttcttatccagtgagacaaaaccggttgctacc
ataatcagaagcatcctccaacaagctttggagtttcgatcatgttttaagagtctcgac
gacctttcggaatcaacagtgaatcaacttaatctgcattctcttataaacttctctcag
gtggaggttatccgaatgaagtttgagagtaacatcaaagatttatatattttgcattca
aagtcatcaaagtatgaagagcttggtctttcccgtttctgggggtatctgaactacaat
gagtatcattccttaaaaattagcaaagatgtgggctgcttctactttttatag
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