Brachypodium distachyon (stiff brome): 100827553
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Entry
100827553 CDS
T01717
Name
(RefSeq) E3 ubiquitin-protein ligase DIS1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100827553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100827553
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100827553
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
100827553
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-Di19
FAIM1
Motif
Other DBs
NCBI-GeneID:
100827553
NCBI-ProteinID:
XP_003562526
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All DBs
Position
1:complement(15184691..15188350)
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AA seq
379 aa
AA seq
DB search
MSSSDCPNANKKLKTLPPSKPRGLKANKQTPSLRQSLRDEQHKGASFISNALAVSSPPPQ
GAPSQAKPSENSVPIGLTMASGAYLDDTDAEVIDPPKCEMLDVTELIGDPIQHSPKQNAI
VSSNVRELLECPVCLVAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRNELGNIRCLALEK
VAASLEVPCKFQNFGCLGIYPYYCKLKHESQCQYRPYTCPYAGSECTVAGDIPYLVSHLK
DDHKVDMHSGSTFNHRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAF
LRFMGDDAEAKNYSYSLEVGGINRKMTWQGIPRSIRDSHRKVRDSYDGLIIQRNMALCFS
GGDRKELKLRVTGRIWKEQ
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagcgactgtccaaatgcaaataaaaagttaaaaacgctccctccatccaaa
ccccgaggactgaaagcaaacaaacaaactccctctcttcgtcagagtctcagagacgag
caacacaaaggggcttcctttatttcgaacgcgctcgccgtctcgagccctccgccgcag
ggagctccaagccaagccaagccatccgagaattctgtaccaataggtttgaccatggca
tcaggtgcttatcttgatgacactgatgctgaagttattgaccctccaaagtgtgagatg
ttagatgtcactgaactcattggcgatcctatccagcattcaccaaaacagaatgcgata
gtttctagcaatgttcgtgagctattggaatgccctgtgtgtttggttgccatgtatcct
ccaattcatcagtgctccaatggccataccatatgttctggatgcaagccaagggttcat
aatcgctgcccaacttgcaggaatgaactgggtaacataagatgccttgctctggagaag
gtggctgcttctctagaggttccatgcaagttccagaactttggatgcttgggaatatat
ccttattattgcaagctgaaacatgagtcgcagtgccaatacagaccctatacttgccca
tatgctggatctgaatgcactgttgctggtgacattccatatctagtgagtcacttgaag
gatgatcataaggttgacatgcacagtggaagcaccttcaatcaccgttatgtcaaatca
aatcctcatgaggttgagaatgctacatggatgcttacggtattcagctgctttggccag
tacttctgcctgcactttgaggcattccagttgggcatggcgcctgtctacatcgccttc
ctcagattcatgggagacgacgccgaagccaagaactacagctacagcctggaggttgga
ggcatcaaccgcaagatgacctggcaaggtatccctcgaagcatcagagacagtcacagg
aaagtccgagacagctacgacgggctcatcatccagcggaacatggccctgtgcttctct
ggtggcgacaggaaggagctcaaactccgggtcacagggagaatctggaaggagcaataa
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