Brachypodium distachyon (stiff brome): 100827554
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Entry
100827554 CDS
T01717
Name
(RefSeq) nuclear poly(A) polymerase 2
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100827554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100827554
Enzymes [BR:
bdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
100827554
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
100827554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_central
PAP_NTPase
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
100827554
NCBI-ProteinID:
XP_003581579
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All DBs
Position
5:22850332..22851780
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AA seq
477 aa
AA seq
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MVSQATAPVLPFGSYRLGVHGRGSDIDALVVGPSYVDRDHDFFGVLGGVLSEMTDDAVTE
LQPVPGAHVPVIKMRFRGVQVDLLFASVCLAVVPEDLDLRDRSVLRGMDLATVRSVNGVR
VADEILRLVPDAGAFRTTLRCVKLWAKARGVYSNVMGFPGGVAWAILVAFVCQLYPNAAP
SVLVSRFFKVLAPWKWPNPVKLRDIEHDDDDLRLLVWDPRRNPRDRTHLMPVVTPAYPCM
NSCYNVSHATLRTITQQLQIGNAVCQKIVASGAGWGALFEPFHFFKEYKSYLRVDVKVAG
GGGEGDLREWKGWVESRLRQLVMRVETATAGMLLCHPNPQAYAAKPTDLQRTTSFFVGLS
KPQPQPQEKEQQQPQVPFDLRETAEEFKRKVYMYVSWRPGMEVEVSHNRRKDLPSYVLEQ
ILPAGHLKRKRPQDDDPSPSSSPASDDSESSSRHTKRVEAASTTGSLSDGTIEQRLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggtctcccaggccacggccccggtgctccccttcggctcgtaccgcctcggcgtccac
ggccgcggctccgacatcgacgccctcgtcgtcggcccttcctacgtcgaccgcgaccac
gacttcttcggcgtcctgggcggcgtgctgtccgagatgactgacgacgccgtgacggag
ctgcagccggtccccggcgcgcacgtgcccgtcatcaagatgcggttccgcggcgtgcag
gtggacctcctcttcgccagcgtgtgcctggccgtggtgcccgaggacctggacctgcgc
gaccgctccgtgctccgtggcatggacctggccacggtgcgcagcgtcaacggcgtgcgc
gtggccgacgagatcctgcggctcgtcccggacgcgggcgccttccgcaccacgctgcgc
tgcgtcaagctctgggccaaggcgcgaggcgtctactccaacgtcatggggttccccggc
ggcgtggcgtgggcgatcctcgtggcgttcgtctgccagctctaccccaacgccgcgccc
agcgtgctggtgtctcgcttcttcaaggtcctggctccgtggaagtggcccaaccccgtc
aagctccgggacatcgagcacgacgacgacgatctccggctcctggtgtgggacccgcgg
aggaacccacgcgaccggacccacctgatgcccgtcgtcaccccagcctacccctgcatg
aactcgtgttacaacgtctcgcacgccacgctgcgcaccatcacgcagcagctccagatc
ggcaatgccgtctgccagaagatcgtcgcgtccggcgccgggtggggcgcgctgttcgag
ccgttccacttcttcaaggagtacaagagctacctgcgcgtggacgtgaaggtcgccggg
ggcggcggggagggcgatctacgggagtggaaggggtgggtggagtcgcggctcaggcag
ctggtgatgagggtcgagacggccacggccggcatgctgctctgtcatcccaacccgcaa
gcctacgccgccaagccaactgatcttcagcgcacgacctccttcttcgtcggcctgtcc
aagccacagccacagccacaggagaaggagcagcagcagccccaggtaccgttcgaccta
cgagagacggcggaggagttcaagcgcaaggtgtacatgtacgtgtcctggaggcccggc
atggaggtggaagtctcgcacaacagaaggaaggacctgccgtcctacgtgctggagcag
atcctcccagccggccatctcaagaggaaacgaccacaagacgatgatccttctccgtcg
tcgtcgcctgcttccgatgactccgagtcgagcagccggcacaccaagagggtggaggca
gcaagcacaaccggatcgctctctgatggcactattgaacagcgccttgtctga
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