Brachypodium distachyon (stiff brome): 100827626
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Entry
100827626 CDS
T01717
Name
(RefSeq) KH domain-containing protein HEN4 isoform X2
KO
K21444
poly(rC)-binding protein 3/4
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100827626
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
100827626
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
100827626
NCBI-ProteinID:
XP_003560265
UniProt:
A0A0Q3RTV6
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Position
1:24257292..24269140
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AA seq
656 aa
AA seq
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MAGAKPHFAPHAAYAQAPASPSASTESDSTVDADADVVVFRLLLPRAFGDEDAMRLYAVV
APLRRHTAGLHVRVDALEGYPEDAASRVAVVLGPTSPTRPVEASSSSSGEPLQLSPAQEA
LVSVVDVGGVLHRVVARAPEFVSCLVLVEAAGLEALGRGTLEAIASETNAELRVTSLAEG
ATPSVHSPKEVIEITGDRTTIRKAIVALSSYLQGDLHACSLTTSVTTPSPMFPWKSSEVP
EPNYGDLHSGVSTKCANINVPWIDCPQDVAGNVETENLQQISFRLLCHVNLAGGLIGKKG
MIIKGFETETGASIDVGNPFSGCMERVITISALESPGKHSKVQSAILCIFDRMEEVERNL
MFGKPECSARVLVPKSQFSSLVGLGGAIIKEMVKSTGARIEILDEMDVPACASNCERVLQ
ITGNLVNVRDALFVVSEKLRNHAFSSKCTKHDDGNATASDIIESTASMTVNISSTDNYST
DNFPRTDHEPSVIQMESLENSFSAFHLGSPGSLELESLANAEDTGIINLKNEGQKPPNRS
CAVITGVQKPADGDDDRISKSNHGITSPDENQLMRVMKDPVVTRMTYEIAACGGIFCLLY
RDKGNNLAQLRQITGADISVYDPPPETSDCSIVISGTPDQAQLALAALIDLTRQMS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcaaaaccccactttgcgccgcacgccgcctacgcccaagcacccgcctcc
ccctccgcctccaccgaatccgactcaaccgtagatgccgacgccgacgtcgtcgtcttc
cgcctcctcctgccgcgggcctttggcgacgaagacgccatgcgcctctacgccgtcgtc
gcccctctccgccgccacaccgccgggctgcacgtccgcgtcgatgccctcgaaggatac
cccgaagatgccgccagccgcgtcgcggtggtcctcggccccacctcccccacccgcccc
gtcgaggcctcctcctcctcctccggcgagcccctgcagctctcacccgcgcaggaggcc
ctcgtctcggtcgtagacgtcggcggggtgctccaccgcgtcgtggcccgggcccctgag
ttcgtgtcgtgcctggtcctggtggaggccgcgggactcgaagccctcgggagggggaca
ctggaggcgatcgccagcgagaccaacgcggagcttcgcgtcacgtcgttggcggagggc
gcgacgccgagcgtgcattctcccaaggaggtcatcgagataactggagacagaactacc
ataaggaaggctattgttgctttgtctagctatcttcaaggtgatttacatgcttgcagc
ttgacaacttctgttacgacaccaagcccaatgttcccatggaaatcttcagaagttcct
gagcctaattatggagatttgcactcaggggtatccactaaatgtgcaaacatcaatgtc
ccttggattgattgtccacaagatgttgcaggaaatgtcgaaactgaaaatctccagcag
atttcgtttagacttctctgtcatgtcaatcttgctggaggtttgattggcaagaagggc
atgattatcaaagggtttgaaactgaaactggagcttctattgacgttggtaatcctttc
agtgggtgcatggaacgtgtgataacaatttcagccttagagagtccaggtaaacactcc
aaggtgcagagtgcaatcctttgtatctttgacagaatggaagaggttgaaaggaacttg
atgtttggcaagccagaatgctcagcgagggtgcttgtgcccaaaagccaatttagttct
ctagttggtttaggtggtgctataatcaaggaaatggttaagtcaacaggagcaagaatt
gagattttggatgagatggacgttccagcttgtgcctcaaactgtgaacgagttctgcag
atcactgggaatctagtgaatgtcagagatgctttatttgttgtaagcgagaaactgcgt
aatcatgctttctcttctaagtgtaccaagcacgatgatggtaatgctaccgcttcagat
atcattgaatcaactgcaagcatgacggtcaatatttcttcaacagacaactattcgact
gacaatttcccaaggactgatcatgaaccctctgtaattcaaatggagtcactcgagaac
tcgttcagtgccttccacttgggatctcctggttctttagaacttgagagtcttgctaat
gctgaggacactggaatcattaatttaaaaaatgaggggcagaaacctcctaataggagt
tgtgctgttatcactggggtgcagaaacctgctgatggggatgacgacagaatcagcaag
tcaaatcatgggatcacatctccagacgaaaaccaacttatgagggtaatgaaggatccc
gtcgtaactagaatgacatatgagattgctgcttgtggtggcattttttgtcttctgtat
agggataagggaaacaacttggcccagctcagacagatcactggtgcagacattagcgtt
tatgatccgcctccagagaccagtgactgttcgattgtgatatctggaacgccagatcag
gcacaattagctttggctgctctcattgacttgacccgacagatgtcatga
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