Brachypodium distachyon (stiff brome): 100827642
Help
Entry
100827642 CDS
T01717
Name
(RefSeq) calmodulin-binding transcription activator 4 isoform X1
KO
K21596
calmodulin-binding transcription activator
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bdi03000
]
100827642
Transcription factors [BR:
bdi03000
]
Eukaryotic type
Other transcription factors
Others
100827642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CG-1
IQ
Ank_2
TIG
Ank
Ank_4
Ank_3
Ank_5
Motif
Other DBs
NCBI-GeneID:
100827642
NCBI-ProteinID:
XP_010239809
LinkDB
All DBs
Position
5:10832386..10840851
Genome browser
AA seq
1028 aa
AA seq
DB search
MSQILSLVVGFDINVLLKEARSRWLKPSEVYYILLNHERLPITHEPPNKPPSGSLFLYNR
RVNRFFRKDGYAWRRKKDGRTVGEAHERLKVGNLDALSCYYAHGDENPCFQRRCFWMLEP
AYDHIVLVQYREVAEGRNYSASVSNESAGSLSALSYPNDIYGKQYHSSTSGSSESSESRH
SYSNSITEVSSGSANKMYNNHSGVLLSIPEFEQTTVIGAPELGQSSLEQSSEFCLTNKSG
LKQALKKIGEHLGLADNDDDDYIYINQSQPLDFDTSIEAADRQGHHTSNSLGNVSGEKQA
NQIQAGETQNGVSRGILPSWGNVLQSNSVSSASSAYMQSSEYQPPGGLDSSDLQLQLSAA
TRFLLGPEDSIDSPSYNCIARDEGINGIDTLSVHNSSLQSCLNPDWQSLTPITLESNACG
SEIFELLSDHCQFEPSSGLDTRLTLTQKQQFNIHEISPEWAFCSEVTKVIITGDFLCDPS
NSCWGVMFGDNEVPVEIVQPGVLRCHTPLHSSGKLTLCITNGNREVCSEVKDFEFRAKPT
VSSFRDLTQSSRSMKSSEELSLLAKFARMLLCENGSSAVLDGDPQSTQRPKLNMNEEHWQ
QLIDELNVGCENPLSMVDWIMEELLKSKLQQWLSLKLQGNDGTCSLSKHEQGIIHLISAL
GYEWALSSVLSAGVGINLRDSNGWTALHWAAYFGREKMVAALLAAGASAPAVTDPTAQDP
VGKTAAFLASKRGHMGLAGYLSEVSLTSYLLSLTIEESDISKGSAAIEAERAVESISQRS
AQLHGGTEDELSLKDSLAAVRNAAQAAARIQNAFRAFSFRKRQHKDARLKDEYGMTQEDI
DELAAASRLYYQHHVSNGQFSDKAAVSIQKKYRGWKGRKNFLNMRRNVVKIQAHVRGHQV
RKKYKTFVSTVSVLEKVILRWRRKGHGLRGFRAEQPAMIAAEEEEEEDDDDFDDDDDEAV
KIFRRQKVDESVKEAVSRVLSMVESPEARMQYRRMLEEFRQATIDTGASDEATSRLNDDL
LMGMDFMF
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgagccagattctttctctggttgtaggtttcgacatcaacgtgcttctcaaagaagcg
aggagcaggtggttaaagccttctgaagtctactatatcttgctgaatcatgagaggctc
ccaatcacccatgagccaccaaataagccacccagtggttcactattcctttataatcgc
cgtgttaatcggtttttccggaaagatggttatgcatggcggaggaagaaggacggaaga
actgttggggaggctcacgagcgattgaaggttggaaatcttgatgctctaagttgctac
tacgctcatggagatgaaaatccttgtttccagagacgatgtttctggatgctggaacct
gcatacgaccacattgtgctggtacaatatagagaagtagctgagggaagaaattactca
gcatcagtgtcaaatgaatcagcaggatctctttcagccttgagttatccaaatgacata
tatggaaagcaatatcacagctccacttctggctctagtgagagcagtgagtcccgtcac
agctattctaattctataactgaagtaagttctggttctgcaaacaaaatgtacaacaat
catagtggcgttctactaagcataccggagttcgagcaaacaactgtgataggggcacca
gagcttggccagagtagtctggaacagagttctgaattttgcttgacaaataaatctggg
ctcaagcaagctttgaagaagatcggtgagcatttaggtttggctgataatgatgatgat
gactacatttacataaatcaatcgcaacctttggactttgatacaagtattgaggctgca
gatagacagggccatcacacaagcaacagcctaggaaatgtttcaggtgaaaagcaagca
aatcaaattcaagcaggagaaactcaaaatggtgttagcagggggatattaccatcatgg
ggtaatgtgctgcaatctaattcagtttcttcagcttcatctgcgtacatgcaaagttca
gaatatcagccaccaggaggcctagacagtagtgatttgcagctgcaactttctgctgct
acaagatttcttttaggaccagaagactctattgactcaccatcttataattgcatagca
agagatgaaggaatcaatggcattgataccctttcagttcataacagtagtcttcaaagc
tgtctgaacccagattggcaaagtttaacacctataacactcgaaagcaatgcatgtggc
tctgaaatattcgagctgctgtcggaccattgtcagtttgaaccctcttctggattagat
acaagactaaccttgacacagaagcaacagttcaacattcatgagatctctccagaatgg
gcattctgctctgaggtcaccaaggtcatcattactggagatttcttgtgtgatccgtcg
aattcgtgctggggagtaatgtttggtgacaatgaggtgcctgttgaaattgttcagcca
ggtgttctccgctgccacacaccgctacacagcagcggaaagctcacactctgtattacc
aatgggaatagggaagtttgcagtgaagtcaaggactttgagttccgtgcaaagccgacg
gtttctagtttcagagatctcacacagtcatctagatctatgaagtctagtgaagagttg
tcacttcttgcaaagtttgcaagaatgcttttgtgtgagaatggatcatctgcagttctg
gatggtgatcctcagtctacacagcgtccaaaacttaacatgaatgaggagcactggcag
cagttgattgatgaactcaatgtaggatgtgaaaatccactaagcatggttgattggatt
atggaggaattgcttaaaagtaaattacaacagtggttatcattgaagctccaaggaaat
gacggaacatgttctctctccaagcatgagcaaggtattatacacttaatctctgcactt
ggctatgagtgggcactgtcttcggttctcagtgctggtgttggcataaatttgcgtgat
tccaatggatggactgcacttcattgggctgcttattttggaagggaaaagatggttgca
gcacttcttgctgctggtgcatcagctccagcagtcaccgatccaactgcacaagatcca
gtggggaaaacagcagccttcctggcttctaaacggggacacatgggccttgcaggctat
ctttcagaagtgtcactaactagctatcttttatcactgactatagaagagagtgatatt
tcaaagggatctgctgcaattgaagcagagagagcagtagagagcatatctcagcggagt
gcccaattgcacggaggcacagaagatgagctctcactaaaggactctttggcagccgtg
agaaatgcagctcaagcagcggcacgaattcaaaatgccttccgtgccttttctttcagg
aagaggcaacacaaggatgctcgacttaaggatgaatatgggatgacgcaagaagatata
gatgaacttgcagctgcatcaaggttatactaccaacatcatgtttcaaacggtcagttt
tctgataaagcagctgtttcaattcagaagaagtacagaggttggaaagggcggaaaaat
tttctcaacatgcgcagaaatgtggttaaaatacaggcccatgtaagaggccatcaagtg
agaaagaaatacaagactttcgtaagcactgttagtgtgctagagaaagtaatactacgg
tggcgtaggaaaggacatggcttacgtggcttccgagctgagcaaccagcgatgattgca
gccgaagaggaagaagaggaagatgacgatgactttgatgatgatgatgatgaagcagtc
aagatcttccgtcgccaaaaggttgatgaatctgtcaaggaggctgtgtcaagagtgctg
tccatggtagagtctcctgaagcaaggatgcagtaccgtcgaatgcttgaggagtttcgc
caagcaactattgacaccggtgcatctgatgaggcaacatcaagacttaatgatgacttg
ctaatgggaatggatttcatgttctga
DBGET
integrated database retrieval system
