KEGG   Brachypodium distachyon (stiff brome): 100827658
Entry
100827658         CDS       T01717                                 
Name
(RefSeq) uncharacterized WD repeat-containing protein C17D11.16
  KO
K14791  periodic tryptophan protein 1
Organism
bdi  Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bdi03009]
    100827658
Ribosome biogenesis [BR:bdi03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    100827658
  Pre-60S particles
   Other pre-60S particles
    100827658
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 EIF3I Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_EML WD_LRWD1 Beta-prop_HPS5 Beta-prop_WDR75_2nd MIOS_WD40 Beta-prop_WDR41 Beta-prop_ACSF4 NBCH_WD40 Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_IFT140_2nd Beta-prop_VPS8 WDR90_beta-prop_4th Beta-prop_IFT122_1st PALB2_WD40 BBS2_Mid Josephin
Other DBs
NCBI-GeneID: 100827658
NCBI-ProteinID: XP_003564964
UniProt: A0A0Q3GJK7
LinkDB
Position
2:complement(56784401..56789114)
AA seq 500 aa
MISSITWVPRGAAKSVPIEAEPPTQEEIDEAIKSITLGEGSDADDAEGDDDDAEMELDGA
DGEEVDEVAQAKAAAKALGKSGSGAIGDVTDGLAELNMDAYDDEEEGLEIFSKGLGDLYY
KNNEDDPYIIKNKDDDGDDSDSEIEDMTIKPTDLVIVCAHNEDEFNSLQVSIVEELEDGE
PNMFVHHEVPLSDFPLCTAWMDFNLKDGDKGNFIAVGTMDPAIEIWDLDIVDEVEPHVVL
GGHPKKQKKVKGKKVKKYRKGSHRSSVLGLAWNKEVRNVLASASADKTVKIWDVSAGKCV
VTLQHHDDKVQSVAWSRQSPELLLSGSFDKSVAMNDLKDGGQNCHKWSVEADVESLAWDP
HNEHSFMVSLENGMVQAFDKRTASSNSNFGQPMFTLHAHEKAASSISFSPSTRNFLATGS
TDKMVKLWDLSNNQPSCIASLNPKLGAIFSVSFSDDNPFLLACGGAKGKLKVWNTITEPA
VTNMSNRKMLQHGVGPSKTP
NT seq 1503 nt   +upstreamnt  +downstreamnt
atgatctcgtcgataacctgggtgccgaggggcgccgccaagagcgtccccatcgaggcg
gagccgcccacgcaggaggagatcgatgaggccatcaagagcatcaccttgggcgagggg
agtgacgccgacgacgccgaaggcgatgacgacgacgccgagatggagttggacggtgct
gacggcgaggaggtcgacgaggtcgcccaggccaaggccgccgccaaggcgctcgggaag
agcggttcgggcgccattggcgatgttactgatgggctcgcggagctcaacatggacgcc
tacgatgacgaggaggaagggcttgagattttcagcaaagggttgggagacctgtactat
aaaaacaatgaggacgacccttatataatcaagaacaaagatgatgatggtgatgatagc
gatagtgagattgaagacatgactataaagcctactgatttggtgattgtgtgcgcgcat
aatgaggatgaattcaattctcttcaggtaagtatagtggaagaattggaggacggggaa
cctaacatgtttgttcatcatgaggttccgctctcagattttccactatgcacggcttgg
atggatttcaaccttaaggatggcgacaaagggaattttatagctgttggcaccatggat
cctgcaattgaaatatgggatttagacatagttgatgaggtcgaaccacatgttgtgcta
ggagggcatccaaaaaagcagaaaaaagtgaagggaaaaaaggtgaaaaagtacaggaag
ggaagccatagaagttctgtgcttggccttgcatggaacaaggaggtgaggaatgttctg
gctagtgcaagtgcagacaaaactgttaaaatttgggatgtatctgctggtaaatgtgta
gtcacgctgcaacatcatgatgacaaggttcaatcagttgcctggagccgacagtcacct
gaacttcttctcagcggatctttcgacaaatcagttgccatgaatgatttgaaagatggt
ggacaaaattgtcataaatggtctgtcgaagcagatgtagaaagcttagcttgggatcca
cacaatgaacactcgttcatggtgagtcttgaaaatgggatggttcaagcatttgataag
cggacagcttcatcaaattcaaattttggccagcccatgtttactctccatgcacacgaa
aaggctgcttcttccatatccttctccccatctacccgtaactttcttgctacaggttca
actgataaaatggtgaaactctgggatttgtcaaacaaccagccttcatgcattgcttcg
ctgaacccaaaacttggtgctattttctcggtatcattttcagatgacaaccccttcttg
ttagcctgcggaggagcaaaaggcaaattgaaagtctggaatacaataacggaaccggca
gtcactaatatgtcaaatagaaagatgttgcaacatggggttggcccttcgaagactcct
tga

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