Brachypodium distachyon (stiff brome): 100827681
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Entry
100827681 CDS
T01717
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdi03016
]
100827681
Enzymes [BR:
bdi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
100827681
Transfer RNA biogenesis [BR:
bdi03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
100827681
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_31
Methyltransf_12
MetW
Ubie_methyltran
CMAS
Motif
Other DBs
NCBI-GeneID:
100827681
NCBI-ProteinID:
XP_003570634
UniProt:
I1IF74
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Position
3:58121023..58123388
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AA seq
380 aa
AA seq
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MIQIFSRIAAKSTRRLISASNPHSSILHREEFSCWNPTSRGISTNDSMRSDENLEAQDAS
LPEGKNHSCSPGVQSTPDIEKKYVHCVYDAIAPHFSSTRFAKWPKVAGFLNSLRPGSVVL
DAGCGNGKYLGFNAECFYVGCDISPPLIEICAGRGHEVFVGDAVNLPYRENVGDAAISIA
VLHHLSTEDRRRKAIEELIRVVKRGGLVLITVWAVEQEDKSLLNKWTPLCDKYNEEWVDP
SSPPVRNQSATMLDSIEENDEDTGITKQTDDEMKRRYDGMDDKTTALCSNSIDEHDKTQQ
EYFVPWHLPFHRAEISGASAAALQNGFAKKDDKKGTVVYNRYYHVFVEGELQRLVDGMKN
AAIVDQFYDKSNWCIVLEKL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgatccaaatattttcgaggatagcagcaaagagcactcgccgactcatctctgcatct
aacccgcatagttcaatccttcatcgtgaagaattctcttgttggaatccaacctctcga
ggtattagcaccaacgactccatgaggtcggatgagaatttggaagctcaggacgcatcc
cttcctgaagggaagaaccacagctgctcccctggtgtccagtccactccagacatcgag
aagaagtacgtgcactgcgtctacgatgctatagctcctcatttcagctccacgcggttc
gccaaatggcccaaggtcgcggggttcttgaactcgttgaggccagggtctgtcgtgctg
gatgcgggttgtggcaatggcaagtatttgggcttcaatgctgaatgcttctatgtaggc
tgtgatataagccctccgctgatagagatttgcgcggggagggggcatgaggtgtttgtt
ggagatgccgtcaacctcccatatagggaaaatgttggtgacgccgcgatctcaatagca
gtgttgcatcatttgagtaccgaggataggcggaggaaagccatagaagagttgatccgt
gttgtgaagagaggtggtcttgtgctgattactgtctgggctgtggagcaggaagacaag
tcacttcttaacaagtggactcccttatgtgacaagtataatgaagagtgggttgatcct
agcagtcctccggtgcgtaaccaatcagctaccatgctagatagcattgaagagaatgat
gaagacacgggcatcacgaagcaaacagatgatgagatgaaaagacgttatgatggtatg
gatgataagaccactgcactttgtagtaattctattgatgagcatgacaaaacccagcag
gagtactttgttccttggcatctaccatttcaccgagctgaaattagtggtgcatctgct
gctgctcttcaaaatggatttgcaaagaaagatgataagaagggtactgttgtctacaac
cgctattaccatgtctttgttgaaggggaacttcaaaggttagttgatgggatgaaaaat
gcagctatcgttgaccaattctacgacaaatccaactggtgcatagttctcgagaagctt
tga
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