KEGG   Brachypodium distachyon (stiff brome): 100827690
Entry
100827690         CDS       T01717                                 
Name
(RefSeq) lysine-specific demethylase JMJ25
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
bdi  Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bdi03036]
    100827690
Enzymes [BR:bdi01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     100827690
Chromosome and associated proteins [BR:bdi03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100827690
SSDB
Motif
Pfam: JmjC AT_hook Cupin_2 Cupin_8
Other DBs
NCBI-GeneID: 100827690
NCBI-ProteinID: XP_010235136
LinkDB
Position
3:38223336..38229767
AA seq 1017 aa
MTAKVAEGSCSSLLPVVRKRGRPPKVQTPEVAEAGMTTKVAEGSSLSLQVVVCALPAAGD
HGKNMLPKLHGRLRKALPAQDHGMSLEGIPPGASAGGFVKRVTRRSAQLAKEAEAKALDA
IEADELDAQPAEGEAMAAADDVMGENGSPSAGGFIKRVTRRSAQLAKEAEAKALDAIEAD
ELDAQPAEGEAMAAADDVMGENGSPSAGGFVKRVTRRSAQLAKEAEAKALDAIEADELDA
QPAEREAIAAADDVMGGNGSPSAGGFVKRVTRRSALLANEAEAKALDAIEADELDAQPAE
GEAMAAADDDMGENGSNFVNWEQRGRRSLKLPSERQKVTSKFETSLSRSFQWKHTGRRSF
KSSCASCGDENKTYYCAACSEKKRSERIEDACYLLHYLLPCLETINKEQLAEKEVEAKML
DVPVSSLSIKQAVDTKERIYCSNCNTSIYDLHRRCAGRNCPYNYELCIRCCKELRENNLQ
GCCEVAEFHYPDNGDGYLHGGKPKPCSSKGKDQDHSSRTTANKTKVAEWLAKTQRYVAAN
SSKIPCPPRELGGCNLRDLELVRFFPENELSELEANARTLYDAFTMVNPVDVATVDGACV
NCSCSGSSGSRKKAASKKSSADNSVFYPVFDGSKPDDLKHFQTHWVRGEPVVVQSVLQKM
SGLSWEPRTMLSESRDSSKDVIKAIDCLSCCQVEKGNDEFFKGYYEGENYENNWPCMLKL
KDWPSSDSFEQVLPKHGAVYTDSLPFQPYTNKKSGSLNISTFLPDDILKVDLGPKSYIAY
GVTQELGRGDSVTKLHSDLSDAVNVLMHTTKVAPSTEQETDIMKLKEKHKAQDKRELGGV
EIEMDGDAKGKLSPDYEDQQGALWHIFKREDVPKLEKYLREHSKEFRHVHCSRVNKVYNP
VHDETFYLTKNHMKKLKDEYGVQPWTIVQKLGEAVFIPAGCPHQVRNLQSCTKIALDFVS
PENIGQCMMLCEDYRLLPKAHRAKEDKLEVKKMIVHAVQHAVNTLKEQLHIFFSGKN
NT seq 3054 nt   +upstreamnt  +downstreamnt
atgaccgcaaaggtcgccgaaggatcctgctcatcgttgctgccagtggtgaggaagcga
gggcggccacccaaggtccagaccccggaggttgccgaggcgggcatgaccacaaaggtc
gccgaaggatccagcttgtcgctgcaagtggtagtgtgtgctttgccagcggcaggtgac
catgggaagaatatgctccctaagctgcatgggcggctgaggaaggcactgccagcgcag
gatcatggtatgagtttagaggggatcccgcctggcgcgtccgctggaggcttcgtaaag
agggtgactcgccgtagcgcacaactagcgaaagaagcggaagcaaaggcacttgatgct
atcgaggcggatgaattggatgcgcagcctgccgagggcgaggcgatggcagcggcggat
gatgtcatgggggagaatggaagcccgtccgctggaggcttcataaagagggtgactcgc
cgtagcgcacaactagcgaaagaagcggaagcaaaggcacttgatgctatcgaggcggat
gaattggatgcgcagcctgccgagggcgaggcgatggcagcggcggatgatgtcatgggg
gagaatggaagcccgtccgctggaggcttcgtaaagagggtgactcgccgtagcgcacaa
ctagcaaaagaggcggaagcaaaggcacttgatgctatcgaggcggatgaattggatgcg
cagcctgccgagcgcgaggcgatagcagcggcggatgatgtcatgggggggaatggaagc
ccgtccgctggaggcttcgtaaagagggtgactcgccgtagcgcactactagcgaatgag
gcggaagcaaaggcacttgatgctattgaggcggatgaattggatgcgcagcctgccgag
ggtgaggcgatggcagcggcggatgatgacatgggggagaatggaagcaactttgtgaat
tgggagcagagagggagaaggtccctcaaattgccgagtgagcgccagaaggtgacatca
aaatttgaaacctctctttcccgttcgttccagtggaagcacacagggaggaggtcgttc
aaatcgtcatgcgcgtcctgcggcgacgagaacaagacctactactgcgccgcctgctcc
gagaaaaaaaggtccgagaggatcgaggatgcatgctacttgttgcactacctgctgccg
tgcttggagactatcaacaaggagcaactcgctgagaaggaggtggaggccaagatgcta
gatgtaccggtgtccagtctgagcataaaacaagccgtcgacaccaaagagaggatctat
tgtagcaattgcaacacttcaatctacgatctccacaggagatgcgccggtcgcaactgt
ccatacaattacgaactgtgcatccgctgttgcaaggagcttcgcgagaacaacctccag
gggtgttgcgaagtggccgaattccattaccccgacaatggagacggctacttgcacggc
ggcaagccaaagccatgctcgtccaaggggaaggaccaagaccactcgtcaagaacaacg
gcaaacaaaactaaagttgccgagtggctggccaaaacgcagcgttacgtcgctgccaac
agtagcaaaatcccttgccctccccgcgagctcggcggctgcaacctccgcgatcttgag
ctggtgaggttcttcccggaaaacgagctctcggagctggaggcaaatgctagaactttg
tatgacgcgttcaccatggtcaacccagtcgatgtagcaaccgttgatggtgcctgcgtc
aactgctcctgctcgggcagttctgggagcagaaagaaagctgcttccaagaagagttca
gctgataactccgtattttacccggtatttgacggttccaagccggatgacctcaaacac
tttcagacacactgggtcagaggggaacctgtggttgttcaaagcgtcctgcaaaagatg
tcaggtttgagctgggagccacggacgatgttgtccgagagcagggattcgtcaaaagat
gtgatcaaggctatagattgccttagttgctgccaggttgaaaagggcaatgatgagttc
ttcaaaggatattatgaaggtgaaaactatgagaataattggccttgtatgctaaaactg
aaggattggccttcttcggatagttttgaacaagttctacccaagcatggagctgtttat
acagattctttgccatttcaaccatacacgaataagaagtctgggtcgctcaatatttca
accttccttcccgacgatatcctcaaggttgatttgggccccaagtcatacatagcatat
ggtgtcacacaagagcttggcagaggagactctgttacaaagcttcactctgatttatct
gatgcggtcaatgtattgatgcatactacgaaggtcgccccttctacagaacaagaaact
gacatcatgaaactaaaagaaaagcacaaggcccaagataaaagggaattgggcggtgtt
gaaatagagatggatggcgatgcaaaaggtaagctatcacctgattatgaggatcaacag
ggtgctctatggcacattttcaaacgggaagatgtcccaaaattggaaaaatatttgaga
gagcactccaaggagtttcgtcatgtacattgttcgcgagtaaacaaggtgtataaccca
gtgcacgacgagacattctatctaacaaaaaaccacatgaagaagcttaaagatgaatat
ggagtacagccttggaccatagtacaaaagcttggagaagcagtttttatacctgccggt
tgtccacatcaagtacgaaacctccagtcttgcaccaagattgctctagactttgtttca
cccgagaatattggacaatgtatgatgctatgtgaagattaccgcctgctaccaaaagca
catagggcaaaggaagacaaactagaggtgaagaagatgattgttcatgctgttcagcat
gccgttaataccttaaaagaacagctgcacatattttttagtgggaagaattaa

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