Brachypodium distachyon (stiff brome): 100827804
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Entry
100827804 CDS
T01717
Name
(RefSeq) ribosomal RNA-processing protein 8 isoform X2
KO
K14850
ribosomal RNA-processing protein 8 [EC:
2.1.1.287
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdi03009
]
100827804
Enzymes [BR:
bdi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.287 25S rRNA (adenine645-N1)-methyltransferase
100827804
Ribosome biogenesis [BR:
bdi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100827804
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_8
Methyltransf_11
Methyltransf_31
Methyltransf_25
Methyltransf_23
MTS
Anamorsin_N
Methyltransf_29
DUF4882
Motif
Other DBs
NCBI-GeneID:
100827804
NCBI-ProteinID:
XP_003575272
UniProt:
I1IB54
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All DBs
Position
3:48954109..48959451
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AA seq
289 aa
AA seq
DB search
MEQDSAAVGRKRRRRGGAANRRKTSSSSQEACPAAPQAAAPSSEKRRRKAGEVAAAPKAK
GRKTTSLLDKMRARLSGGHFRMLNEKLYTCSGEDAFEYFKNEPELFDVYHAGYQEQMSRW
PEQPVNVIINWLKSHNKSWTVADFGCGSAAVAKNVKNKVFSIDLVSDDPSVIACDMAHTP
LEPSSVDVAIFCLSLMGTNFPSYLQEANRVLKPSGWLLIAEVRSRLDPNTGGADPDKFSE
AISQLGFSLVSKDANNKMFVLFYFRKKEKSKAVDNIDWPQLKPCLYKRR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagattcggctgccgtcggacgcaagcggcgccgtagaggaggagccgcaaac
cgacggaagacttcctcttcctcccaggaggcttgtccggccgcccctcaggctgctgct
ccatcctcggagaagcggcggcgcaaggctggcgaggtcgctgccgcacccaaggccaag
gggcgcaagactacgagcctgctcgacaagatgcgtgcaaggttatctggaggtcatttc
agaatgttaaatgagaaattgtacacttgcagtggagaagatgcatttgaatactttaaa
aatgagcccgagctttttgacgtgtatcatgcaggatatcaagagcagatgtcacgttgg
ccagagcagccagtaaatgtaataatcaattggttgaagagtcataataaatcgtggaca
gttgctgattttggctgtggcagtgcagcagttgctaaaaacgtgaagaacaaggtcttt
tccatcgatcttgtttcagacgacccttcagtgatcgcttgtgatatggcccatacccca
ttggagccatcatcagtagatgtggcaatattctgtctttctttgatggggaccaacttt
cccagttacttacaggaagcgaacagagtcctcaagccaagtggttggcttcttatcgct
gaagtgcggagtaggctagacccgaacactggaggtgctgatcctgataagttttctgaa
gccatcagccaacttggcttttcacttgtttcaaaggatgcgaacaacaaaatgtttgtc
ctgttttatttcaggaaaaaggaaaagagcaaggcggtggacaacattgattggccccag
ttgaaaccttgcttatacaagcggcgatga
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