Brachypodium distachyon (stiff brome): 100827816
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Entry
100827816 CDS
T01717
Name
(RefSeq) tubulin alpha-2 chain
KO
K07374
tubulin alpha
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04145
Phagosome
bdi04517
IgSF CAM signaling
bdi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100827816
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100827816
09142 Cell motility
04814 Motor proteins
100827816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100827816
03036 Chromosome and associated proteins [BR:
bdi03036
]
100827816
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bdi04812
]
100827816
04147 Exosome [BR:
bdi04147
]
100827816
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100827816
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
100827816
Cytoskeleton proteins [BR:
bdi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
100827816
Exosome [BR:
bdi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100827816
Exosomal proteins of other body fluids (saliva and urine)
100827816
Exosomal proteins of colorectal cancer cells
100827816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
100827816
NCBI-ProteinID:
XP_003558477
UniProt:
I1H7Z9
LinkDB
All DBs
Position
1:68386285..68389181
Genome browser
AA seq
449 aa
AA seq
DB search
MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTSVGVAKDAFNTFFSETGSGK
HVPRALFVDLEPTVIDEVKTGLYRQLFHPEQLISHNEDAANNFARGHYTVGREVVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFTIYPSPQISTA
VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNAVFEPSS
VMAKCDPRHGKYMACCLMYRGDVVPKDVNSAVHSIKTKRAVQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGEDDEDQGDEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagggagataataagcatccacatagggcaggcgggcatccaggtggggaattcctgc
tgggagctctactgcctcgagcatggcatccagcccgacggcctcatgcccagtgatacc
tctgttggggtcgccaaggacgcattcaacacgttcttcagtgaaacgggttcagggaag
cacgttccaagggccttgttcgtcgacctggagcccactgtcattgacgaagtgaagacg
gggttataccgccagctcttccacccagagcagctcatctcccacaatgaagacgccgct
aacaactttgcccgtggacattacacagttggaagagaagtagtggatctttgccttgat
cggataagaaaattggcagacaactgcactggtctccaaggtttcttggttttcaatgct
gttggtggtggaactggctcggggcttggttcattgctactggagcggctatcagtagat
tatggcaggaaatcgaagctcggtttcaccatctatccttcaccacaaatttcaactgcc
gtggtggagccttacaacagcgtgctgtcgacccactcgctgatcgagcacacggacgtg
gtggtgctcctggacaacgaggccatctacgacatctgcaagcggtccctggacatcgag
cggccgacgtacaccaacctcaacaggctgatctcccaggtgatatcgtccctgaccacc
tcgctgcggttcgacggcgccatcaacgtggacatcaccgagttccagaccaacctggtg
ccgtacccgaggatccacttcatgctctcctcctacgcccccatcatctccgtggagaag
gccttccacgagcagcactccgtcccggagatcaccaacgccgtcttcgagccgtccagc
gtcatggccaagtgcgacccgaggcacggcaagtacatggcctgctgcctcatgtaccgc
ggcgacgtcgtccccaaggacgtcaactccgccgtccactccatcaagaccaagagggcc
gtgcagttcgtcgactggtgtcctactggcttcaagtgcgggataaactaccagccgccg
acggtggtaccgggaggggacctggccaaggtgcagcgcgcggtgtgcatgatcagcaac
aacacggccgtggccgaggtcttctcgcgcatcgaccgcaagttcgacctcatgtacgcc
aagcgagccttcgtgcactggtacgtcggcgaagggatggaggaaggggagttctccgag
gccagggaggatctggccgcgctcgagaaggactacgaggaggtcggagccgagggcgaa
gacgacgaggaccaaggcgacgagtattga
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