Brachypodium distachyon (stiff brome): 100827862
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Entry
100827862 CDS
T01717
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3 isoform X1
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100827862
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
100827862
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Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
100827862
NCBI-ProteinID:
XP_003563455
UniProt:
I1GWE1
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Position
1:28990286..28997621
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AA seq
622 aa
AA seq
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MGAEQRRDDMETAADSISDTAAFRMVEHVLQSVSMDPFLVDPSDREQYDILLNILDAVKK
RSLDDEALLVTTLKALSEAVSKIDMMYHYILLNNIFGMCIWFFQRDTRDAYLDLITRLAA
VADKYLRECLQVVVNNFTPPGPLVPYMEQPRWIARKKEIYFQLHECLKTISDTVPLAPRM
LKDIIDRSMPKLFDNKAKMVSFVECMMGLDTDRMGDLIGALLLAKVVDLLTELDVNITLE
DINQEEHNKGIFDMELEDLDEDEDGFGQEGTKVLLGGNACAEKLDGLMVVVCEHLKSCAE
HGYLTKEFDTLKTIFRASLLRVHKSKFAQFIMFYACSLDPEICGLEFAIFLTDTFTKKEE
DPISRMSAVSYVGSYLSRARFISADTVVGILKRLVEWCVEYCDLQNKRGTIAKPNHQIFY
ATCQAVMYVLCFRLRSIMDYPNLKSELFHMPFGFLLTHPLEPLKVCLPSIVNEFLRQAKP
AGLFTAFVDPAFEDAIESDLSRTFGGVNRLDVFFPFDPYLLKESDRYIRPNFEYWSMVKT
TYSNDNGDDDDDELGDIDAPGTNVGSLDDDVEIDMNSDDGLEYSMNKMSITPHRPFYHPM
ATNGDSGLSMPARIRPSVSPPS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggagcagcggcgcgacgacatggagacggcggcggattccatcagcgacacc
gcggccttccggatggtcgagcacgtgctccagtctgtgagcatggatccatttctagtt
gacccaagtgacagagagcaatacgatatcttgctgaacattctagatgctgtcaagaaa
aggagtctagatgatgaggctttgcttgtgacgaccctgaaggcattatcggaagcagta
tccaaaatagacatgatgtaccattatatacttttgaacaatatatttggcatgtgcatt
tggttcttccaaagggatacaagggatgcttatttggatttaatcaccagattggctgcc
gtggcagataagtatctcagagaatgtttgcaggtggttgtgaacaactttactccgcct
ggaccacttgttccatacatggagcagccaagatggattgcaaggaagaaggaaatttat
ttccaattgcacgagtgtttgaaaacaatctctgatactgtacctttagcaccaaggatg
ttaaaggatataatagataggagtatgccgaagttatttgataacaaagctaagatggtc
tcatttgtcgagtgcatgatggggcttgatactgaccgaatgggggaccttattggagct
ctattgctggcgaaagttgttgatttacttacggaactggatgttaatataaccttggaa
gatattaatcaagaggaacataacaaaggtatatttgatatggagcttgaagatttggat
gaggatgaggatggctttggacaagaaggaacaaaagtccttcttggaggaaatgcatgc
gccgaaaagcttgatggtttaatggttgttgtctgcgagcatcttaagtcatgtgcagag
catggttatctaactaaggaatttgacactctgaaaacaatctttcgagcctctctgctg
agggtgcacaaatctaaatttgctcagtttatcatgttttatgcctgctcactcgatcct
gaaatctgcggtcttgaatttgctatttttcttaccgacacttttactaagaaggaagag
gatccaatttctagaatgtctgcagtttcgtatgttggaagctatttgtcccgggcaagg
tttatttctgctgatacggttgttggtatactcaaaagattagttgaatggtgcgttgaa
tattgcgaccttcaaaacaaaagagggaccatagccaaaccaaatcatcaaatattttat
gccacctgtcaggctgtgatgtatgtcctttgcttccgcttgagatctatcatggattac
ccaaatcttaaatcagagctttttcacatgccttttggatttctcttgacccacccactg
gaacctctaaaggtgtgcttgccttcaatagtaaacgagttccttagacaagccaagcct
gccgggttgttcactgcatttgtggatccagcatttgaagatgcaattgaatctgatttg
tccaggacgtttggaggagtcaatagacttgacgtgttcttcccgtttgatccttatttg
ctaaaagaatcagacagatatatacgtccaaattttgagtactggtccatggtcaagaca
acatacagcaatgacaacggtgatgatgatgatgatgagcttggggacattgatgctcct
ggaacgaatgtgggcagcttggatgatgacgttgaaatagatatgaacagtgatgatggc
ttggaatactcgatgaataagatgtctataactccacatcgccctttctaccatccaatg
gccacaaacggtgactctggccttagcatgcctgcaaggatcagaccttcagtgagccct
ccatcatag
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