Brachypodium distachyon (stiff brome): 100827987
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Entry
100827987 CDS
T01717
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bdi01009
]
100827987
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100827987
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
100827987
Protein phosphatases and associated proteins [BR:
bdi01009
]
HAD phosphatases
Fcp/Scp phosphatases
100827987
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100827987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Motif
Other DBs
NCBI-GeneID:
100827987
NCBI-ProteinID:
XP_003569958
UniProt:
A0A0Q3M7U0
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All DBs
Position
3:50845384..50855407
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AA seq
927 aa
AA seq
DB search
MIKSMVYYGNTSIGEVELWPKGETNLGAASWAREIRVDRLSPPSERCVPLVVLHTVAVGA
RCLVMESRPLKAADEPPPPLVAMHAACLRDNKTAVVSLGEEELHLVAMTSRRNLMNQACF
WGYKVPFGLYNSCLTMLNLRCLGIVFDLDETLIVANTTRSFEDRIDSLQRKLNNETDPQR
INGMLAEIKRYQDDKSILKQYIEGDQVYDDGKMYKVQPEIVPPLSDNRQSLTRPVIRLQE
KNIILTRINPSIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWRLL
DPDSRLINSVQLSDRMVCVKSGLRKSLLNVFHDGSCHPGMALIIDDRLKVWDEKDQSRVH
VVPAFTPYYAPQAEANFSIPVLCVARNVACNVRGGFFKDFDEALLPRISNVVYEDVIHDI
PSAPDVGNYLISEDDNVGVVNGNRDLLVFDGTADAEGERRMKEASGAGSALNPIAASFVM
PVAPGQNFVPSSVAPFATPPGMMPLINSLVPQPPFSQPVAQAGLLDPLQGSPAREEGEVP
ESELDPDTRRRLLILQHGQDTRDPTPPLPAVPPVQVPVPPVQPNENWYPVEDGMNPNNLN
RGTTGFPVESVKQPPQPSYFHGGDNNPVSSDRFNYQNQRFPPQLTHAEDDHMLQNPAPPR
FRSFPGQRNNQIESGQNFARNVGTSVGILEEIAPKSGSKVEYRSTLCDTTELQFSIEVWI
VGERVGEGIGGTRREAQWQAAEMSLRNLANKYLLSDPNKITDVNENGFGSNQNFFGYSES
NRNDRLPVASTSEESRFMKTGENNSRKTGGSVAALKELCTVEGYNLVFQARPSPPDGSVS
KETYAQVEVGGQTLGKGVGMTWEEAKLQAADEALVTLRSMLGQLAQKRSGSPRSLAPNFS
KRFKSDFPRAVQRAPYGRYSRIEGHVP
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagtcgatggtttattacgggaacacctccatcggggaggtggagttgtggccc
aagggcgagacgaacttgggtgcggcgtcttgggcgcgagagattcgcgtggaccgtctt
tccccgcccagcgagcggtgcgtgccgctcgtggtgttgcacaccgtagcggttggggct
cgctgcctcgtcatggagtccaggccgctcaaggccgccgacgagccaccaccgcctctt
gtcgccatgcacgctgcttgcctcagggataacaagactgcagttgtttcgctaggagag
gaagaattgcatttagtggcaatgacatcacggagaaacttgatgaatcaagcttgtttc
tggggatataaagtgccatttggtttgtacaattcttgcttgaccatgttaaatcttcgg
tgcctcggtattgtgtttgaccttgatgagacattgattgtcgccaataccacacggtca
tttgaggacagaattgattcacttcaaagaaagctgaataatgagaccgatccacagcgc
ataaatggtatgttagcagagatcaagaggtaccaagatgataagtctatcctaaagcag
tatatagaaggtgatcaggtctatgatgatggaaaaatgtataaagtgcaacctgagatt
gttccaccattgtctgataaccgccaatcattgacacgtccagttataagattacaagag
aaaaatattatcttgacaaggataaatccttcgataagagataccagcgttcttgttcgg
ttaaggccagcatgggaggatctccgaagttacttgattgcaagaggtcgcaagcgtttt
gaggtatatgtgtgtacaatggctgagagggactacgctttagaaatgtggagattgctt
gatccggactctagattgataaactctgttcaacttagtgacagaatggtgtgtgtaaaa
tctggcttaagaaagtccttgctaaatgttttccatgatggatcttgccatcctggaatg
gcactcataattgatgaccgtctgaaagtttgggacgagaaagatcaatctagagttcat
gtggttcctgctttcactccatattatgcacctcaagcagaggcaaacttttctatccca
gttctgtgtgttgctagaaatgttgcatgcaatgttaggggaggtttcttcaaagacttt
gatgaagccctcttaccaaggattagtaatgttgtttatgaggacgtaatacatgatatc
ccatcagccccagatgtgggcaattatttgatttcagaggatgataatgttggagtagtg
aatgggaatagagatttgctggtgtttgatggtacggctgatgctgaaggtgagaggaga
atgaaggaagcatctggcgctggcagtgctttaaatccaatagcagctagctttgtgatg
ccagtagcccctggtcaaaattttgttccatcttcagtagcaccatttgcaacaccccct
ggcatgatgcctttgattaacagtctggttccacaacctccattcagccaaccagttgct
caagcaggtctcttagatccactgcaaggttctccagctagagaagagggtgaagttcct
gagtctgagttagatcctgacacaaggagaaggcttctcatattgcaacatggtcaagac
acaagagatcctacacctcctcttccagcagtacctcctgtgcaagttccagttcctccg
gtgcaacctaatgaaaactggtaccctgtggaggatgggatgaacccaaataatctgaac
aggggtacaacaggatttcctgtagaatctgtaaagcaaccgcctcaaccatcttacttc
catggtggggataataatcccgtatcttctgataggtttaactatcagaaccagaggttt
ccccctcagctaacacatgctgaggatgatcacatgcttcagaatcctgcacctccaaga
ttcagatcgtttcctggtcagagaaacaaccagattgaatcaggacaaaactttgcgcga
aatgtaggtacctctgttggaatactagaggagattgcaccaaagtctggatcgaaggtg
gaatacaggtcaacattatgtgataccacggaactacagttctctattgaggtttggata
gttggagaaagagtaggcgaaggcattggtggtacaaggagagaagcacagtggcaagct
gcagagatgtctttaagaaatttggctaataaatacctcttgtctgatccaaataagatt
actgatgtgaatgaaaatggttttggtagcaatcaaaacttttttggatactctgaaagt
aataggaacgatagattgccagttgcgagtacttcagaggaatcccgatttatgaaaaca
ggggagaataattctaggaaaacgggaggttctgttgctgctcttaaggaactttgcacg
gttgagggatacaacttagtttttcaagcgcggccaagtcctccagatggttcagtaagc
aaggaaacttatgctcaggtagaagttggtgggcaaacgcttggcaaaggagttggaatg
acatgggaagaagctaagcttcaggctgctgatgaggctcttgtaacattgagatccatg
cttggtcaacttgctcagaaacggtctggttctcccaggtcattggcacccaattttagt
aagcgcttcaagtcagatttcccgcgagcagtgcaaagggctccatatggtagatattcc
aggatcgaaggccatgttccttga
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