Entry |
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Name |
(RefSeq) protein argonaute 12
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KO |
K11593 | eukaryotic translation initiation factor 2C |
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Organism |
bdi Brachypodium distachyon (stiff brome)
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Brite |
KEGG Orthology (KO) [BR:bdi00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:bdi03019]
100828135
03036 Chromosome and associated proteins [BR:bdi03036]
100828135
Messenger RNA biogenesis [BR:bdi03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100828135
Chromosome and associated proteins [BR:bdi03036]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100828135
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
100828135
microRNA pathway
RISC loading complex
100828135
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
1:9307067..9313002
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AA seq |
917 aa
MAPAEVLGAEVGRKMVLQQAEAGQQRPSSSSAAVAKVEAESKGKVDQVVVAAAAPRMLPP
LSSKAEKFPARPGFGTVGKRCRVRANHFLVQVAEKEIYHYDVVINPETRSRERNRLIINE
LVRLHKQYLDGRLPVYDGRKSIYTAGALPFTNKEFVVKLAKANQREEEYKVTIKHASNLD
LYSLRQFLAGRQRELPQDTIQALDIALRECPTTKYVSISRSFFSQYGHGGDIGNGAECWR
GYYQSLRPTQMGLSLNIDILATAFYKAQPVMAFAVEYLNMRDASRPLSDQDRLKLKKALR
GVRVVATHRKDKTIRYKISGIPAAPLKELMFDQDGVRISVVQYFKQQYNYSLKYTNWPCL
QAGSDSRPIYLPMEVCSIVEGQRYSRKLNERQVTGILRMACERPAQRESSVLEIVNRNNY
GNDHYSKEFGMNVMNQLTLVDARVLPAPRLKYHDSGRDRVCNPSLGQWNMINKRMVNGGS
MNYWACITFSSRLHPNDIGLFCHDLAQICNNIANEYDMKPCVDITQPRRQESVESAIRNI
HRHSSQVLAEQGLTGKQLELLIIILPDISGSYGRIKRLCETELGLMTQCCLPKNVQKGGK
QYLENLSLKINVKTGGSNTVLEDALYKRIPLLTDVPTIVFGADVTHPSPGEDASPSIAAV
VASMDWPEVTKYKCLVSSQGHREEIIADLFSEVKDPQNGLVAGGMIRELLVSFYKATKCK
PSRIIFYRDGVSEGQFSQVLLYEMDAIRKACATLQEGYLPPVTFVVVQKRHHTRLFPENH
RARDLTDRSGNILPGTVVDTKIFHPTEFDFYLCSHAGIQGTSRPTHYHVLLDENGFSADA
LQTLTYNLCYTYARCTRSVSIVPPAYYAHLGAFRARYYMEDEFSDQGSSSAATSQRSGLA
KQLPKIKDNVKEFMFYC |
NT seq |
2754 nt +upstreamnt +downstreamnt
atggcgccggcggaggtgctgggcgccgaggtggggcgcaagatggtgctgcagcaggcg
gaagcgggccagcagcgtccatcgtcgtcatcggccgccgttgcgaaagtggaggcggaa
agtaagggaaaggtggatcaggtggtcgtggcggcagcggcacctcggatgctgccgcct
ttgtcgagcaaggcagagaagttcccggcgcggccggggtttgggaccgttgggaagagg
tgccgagttcgcgccaaccattttctggtgcaggtcgcagagaaggagatctaccattac
gatgtggtgattaatccggaaactaggtctcgcgaacgaaacagattgataatcaatgaa
cttgttagattgcacaaacaatacttggatggcagactacctgtttatgatggtagaaag
agcatctatactgctggtgccctcccattcacgaacaaagaatttgtcgtgaaacttgcg
aaagcgaaccaacgggaggaggaatacaaggtgacaataaagcacgcttcaaatctagat
ctgtacagtcttcggcagttcttggctggtaggcagagggagttgccgcaggacactatc
caggcgcttgacattgctcttagagaatgccccaccacaaagtatgtatctatctcaaga
tcatttttctctcagtatggacatggtggtgacattggcaacggtgcggaatgctggagg
gggtattaccaaagtctccgccccacacagatgggattgtcactaaatattgatatattg
gcaacagcattttacaaggcccagccagtgatggcttttgcagttgaatatctgaatatg
cgagatgcttcaaggcccttatctgatcaggatcgtcttaagctgaagaaagctcttaga
ggtgtccgggttgtggccactcatcggaaagataaaaccatacgttacaagatcagtggg
ataccagcagctccattgaaggaattaatgtttgatcaagatggggtgcgcatatcagtt
gtccagtacttcaagcagcaatacaattactctttgaaatatactaactggccatgcctt
caagctggcagtgatagccgaccaatatatttgcctatggaggtttgcagcatcgtcgag
ggacaacggtattctagaaagctgaatgaacgccaagttacaggcatactgaggatggcg
tgtgaaagacccgctcaaagggagagcagtgttctagagattgtcaataggaataattat
ggcaatgaccactactcaaaagaatttggcatgaatgtgatgaaccaacttaccttggtt
gatgcgcgtgtacttcctgccccaaggctaaaatatcacgactctggacgagatagagta
tgtaatccttccctaggacaatggaatatgattaacaagagaatggtcaatggaggatcc
atgaactattgggcgtgcataactttttcttctcgcctgcacccaaatgatattggcctg
ttttgccacgatttggcccagatatgcaataacattgcaaatgaatatgatatgaaacca
tgcgtggatatcacacaaccgcgccgtcaggagagtgtcgagtctgcaatcagaaatatc
cataggcattcttcacaagtgcttgctgagcaaggtctaacagggaagcaacttgagtta
ttaatcatcatattacctgatattagcggttcttatgggaggataaaacggctttgtgaa
actgagcttggtctaatgactcaatgctgcttacctaagaatgtccaaaagggtgggaaa
cagtatcttgaaaatctttccctgaagatcaacgttaagaccggggggagcaatacggta
cttgaagatgctttgtacaagaggataccacttttaacagatgtgcctacaatagttttt
ggagctgatgtgacccacccgtctcctggagaagatgcgtctccatctattgcagcggta
gttgcatccatggattggccagaagtgacaaagtacaaatgtttggtctcttcacaaggt
catagggaagaaatcatagctgaccttttctcagaagtgaaagatccacagaacggactt
gttgccggtggaatgataagggaactgcttgtttcattctacaaagcaaccaagtgcaaa
cctagcaggattatattttatagagatggtgttagcgagggacagtttagccaagtcttg
ctttatgaaatggacgcaatacgcaaggcttgtgctactctgcaggagggctacctccca
ccagttacatttgttgttgtgcaaaagaggcatcacactcgcctatttcctgaaaatcat
cgtgcacgagatttgacagatagaagtggaaatatcctacctggaactgttgttgacaca
aagatcttccatcctactgagtttgatttttacctttgtagccacgctggcattcaggga
actagccgccctacacattatcatgttcttcttgacgaaaacggtttcagcgctgatgct
ctgcaaaccttgacctacaatctttgctacacgtatgcccggtgcacccgttcagtatca
atagttcctccagcgtattatgcacacctgggagccttccgtgcgcgttactacatggag
gatgagttctctgaccagggttcatcctccgcagcaacttcacagcggtctgggcttgca
aagcagctcccgaagatcaaggacaatgtcaaagagttcatgttctactgctga |