Brachypodium distachyon (stiff brome): 100828135
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Entry
100828135 CDS
T01717
Name
(RefSeq) protein argonaute 12
KO
K11593
eukaryotic translation initiation factor 2C
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100828135
03036 Chromosome and associated proteins [BR:
bdi03036
]
100828135
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100828135
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100828135
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
100828135
microRNA pathway
RISC loading complex
100828135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
100828135
NCBI-ProteinID:
XP_014758888
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All DBs
Position
1:9307067..9313002
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AA seq
917 aa
AA seq
DB search
MAPAEVLGAEVGRKMVLQQAEAGQQRPSSSSAAVAKVEAESKGKVDQVVVAAAAPRMLPP
LSSKAEKFPARPGFGTVGKRCRVRANHFLVQVAEKEIYHYDVVINPETRSRERNRLIINE
LVRLHKQYLDGRLPVYDGRKSIYTAGALPFTNKEFVVKLAKANQREEEYKVTIKHASNLD
LYSLRQFLAGRQRELPQDTIQALDIALRECPTTKYVSISRSFFSQYGHGGDIGNGAECWR
GYYQSLRPTQMGLSLNIDILATAFYKAQPVMAFAVEYLNMRDASRPLSDQDRLKLKKALR
GVRVVATHRKDKTIRYKISGIPAAPLKELMFDQDGVRISVVQYFKQQYNYSLKYTNWPCL
QAGSDSRPIYLPMEVCSIVEGQRYSRKLNERQVTGILRMACERPAQRESSVLEIVNRNNY
GNDHYSKEFGMNVMNQLTLVDARVLPAPRLKYHDSGRDRVCNPSLGQWNMINKRMVNGGS
MNYWACITFSSRLHPNDIGLFCHDLAQICNNIANEYDMKPCVDITQPRRQESVESAIRNI
HRHSSQVLAEQGLTGKQLELLIIILPDISGSYGRIKRLCETELGLMTQCCLPKNVQKGGK
QYLENLSLKINVKTGGSNTVLEDALYKRIPLLTDVPTIVFGADVTHPSPGEDASPSIAAV
VASMDWPEVTKYKCLVSSQGHREEIIADLFSEVKDPQNGLVAGGMIRELLVSFYKATKCK
PSRIIFYRDGVSEGQFSQVLLYEMDAIRKACATLQEGYLPPVTFVVVQKRHHTRLFPENH
RARDLTDRSGNILPGTVVDTKIFHPTEFDFYLCSHAGIQGTSRPTHYHVLLDENGFSADA
LQTLTYNLCYTYARCTRSVSIVPPAYYAHLGAFRARYYMEDEFSDQGSSSAATSQRSGLA
KQLPKIKDNVKEFMFYC
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggcggaggtgctgggcgccgaggtggggcgcaagatggtgctgcagcaggcg
gaagcgggccagcagcgtccatcgtcgtcatcggccgccgttgcgaaagtggaggcggaa
agtaagggaaaggtggatcaggtggtcgtggcggcagcggcacctcggatgctgccgcct
ttgtcgagcaaggcagagaagttcccggcgcggccggggtttgggaccgttgggaagagg
tgccgagttcgcgccaaccattttctggtgcaggtcgcagagaaggagatctaccattac
gatgtggtgattaatccggaaactaggtctcgcgaacgaaacagattgataatcaatgaa
cttgttagattgcacaaacaatacttggatggcagactacctgtttatgatggtagaaag
agcatctatactgctggtgccctcccattcacgaacaaagaatttgtcgtgaaacttgcg
aaagcgaaccaacgggaggaggaatacaaggtgacaataaagcacgcttcaaatctagat
ctgtacagtcttcggcagttcttggctggtaggcagagggagttgccgcaggacactatc
caggcgcttgacattgctcttagagaatgccccaccacaaagtatgtatctatctcaaga
tcatttttctctcagtatggacatggtggtgacattggcaacggtgcggaatgctggagg
gggtattaccaaagtctccgccccacacagatgggattgtcactaaatattgatatattg
gcaacagcattttacaaggcccagccagtgatggcttttgcagttgaatatctgaatatg
cgagatgcttcaaggcccttatctgatcaggatcgtcttaagctgaagaaagctcttaga
ggtgtccgggttgtggccactcatcggaaagataaaaccatacgttacaagatcagtggg
ataccagcagctccattgaaggaattaatgtttgatcaagatggggtgcgcatatcagtt
gtccagtacttcaagcagcaatacaattactctttgaaatatactaactggccatgcctt
caagctggcagtgatagccgaccaatatatttgcctatggaggtttgcagcatcgtcgag
ggacaacggtattctagaaagctgaatgaacgccaagttacaggcatactgaggatggcg
tgtgaaagacccgctcaaagggagagcagtgttctagagattgtcaataggaataattat
ggcaatgaccactactcaaaagaatttggcatgaatgtgatgaaccaacttaccttggtt
gatgcgcgtgtacttcctgccccaaggctaaaatatcacgactctggacgagatagagta
tgtaatccttccctaggacaatggaatatgattaacaagagaatggtcaatggaggatcc
atgaactattgggcgtgcataactttttcttctcgcctgcacccaaatgatattggcctg
ttttgccacgatttggcccagatatgcaataacattgcaaatgaatatgatatgaaacca
tgcgtggatatcacacaaccgcgccgtcaggagagtgtcgagtctgcaatcagaaatatc
cataggcattcttcacaagtgcttgctgagcaaggtctaacagggaagcaacttgagtta
ttaatcatcatattacctgatattagcggttcttatgggaggataaaacggctttgtgaa
actgagcttggtctaatgactcaatgctgcttacctaagaatgtccaaaagggtgggaaa
cagtatcttgaaaatctttccctgaagatcaacgttaagaccggggggagcaatacggta
cttgaagatgctttgtacaagaggataccacttttaacagatgtgcctacaatagttttt
ggagctgatgtgacccacccgtctcctggagaagatgcgtctccatctattgcagcggta
gttgcatccatggattggccagaagtgacaaagtacaaatgtttggtctcttcacaaggt
catagggaagaaatcatagctgaccttttctcagaagtgaaagatccacagaacggactt
gttgccggtggaatgataagggaactgcttgtttcattctacaaagcaaccaagtgcaaa
cctagcaggattatattttatagagatggtgttagcgagggacagtttagccaagtcttg
ctttatgaaatggacgcaatacgcaaggcttgtgctactctgcaggagggctacctccca
ccagttacatttgttgttgtgcaaaagaggcatcacactcgcctatttcctgaaaatcat
cgtgcacgagatttgacagatagaagtggaaatatcctacctggaactgttgttgacaca
aagatcttccatcctactgagtttgatttttacctttgtagccacgctggcattcaggga
actagccgccctacacattatcatgttcttcttgacgaaaacggtttcagcgctgatgct
ctgcaaaccttgacctacaatctttgctacacgtatgcccggtgcacccgttcagtatca
atagttcctccagcgtattatgcacacctgggagccttccgtgcgcgttactacatggag
gatgagttctctgaccagggttcatcctccgcagcaacttcacagcggtctgggcttgca
aagcagctcccgaagatcaaggacaatgtcaaagagttcatgttctactgctga
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