KEGG   Brachypodium distachyon (stiff brome): 100828214
Entry
100828214         CDS       T01717                                 
Name
(RefSeq) DNA polymerase epsilon subunit B isoform X1
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03030  DNA replication
bdi03410  Base excision repair
bdi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100828214
   03410 Base excision repair
    100828214
   03420 Nucleotide excision repair
    100828214
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bdi03032]
    100828214
   03400 DNA repair and recombination proteins [BR:bdi03400]
    100828214
Enzymes [BR:bdi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     100828214
DNA replication proteins [BR:bdi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    100828214
DNA repair and recombination proteins [BR:bdi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      100828214
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT DNA_pol_D_N CcmE
Other DBs
NCBI-GeneID: 100828214
NCBI-ProteinID: XP_003574603
UniProt: A0A0Q3HYH0
LinkDB
Position
3:40131979..40137657
AA seq 533 aa
MAAPSAAMRKKLQRKFRLRGFTLKVDALEEAATFLARFPDAEDDALDLLLDELDKEPLKS
SILDGDAVRRVVSLLVEAEEAVDAASPAATSARSALRVVDSFVVPRFQYDPIKKVFYEHT
GRLAIHGEASDKAALYRDRYQVLLQRLARDKYFSRPAFETVMTEKDSCEITSIQSLIGCT
GRRWIMGVISQLEERQFYLEDLTGAVPIDLSNAKITSGFFVENTVIVAEGELLSNGIFQV
NTCGFPPLEDREASLSLLMGLDFFGGGVIPTEETLRLSSLENKAVNDMFVILSDVWLDSA
ETMEKLAVVLDGYDSVEVVPSLFVLMGNFCSRPCNLAFNSFEELRLQFGKLGEMIAARTR
LKEHSRFLFIPGPDDAGPSKALPRCALPKYLIEELQKHIPNAIFVSNPCRVRFYTQEIVF
FRQDLLYRMRRSCLIPPTTEETSDPFEHLVATITHQSHLCPLPLTVQPIIWNFDHCLRLY
PTPHTIVLGDRSEQKAFKYTGITCFNPGSFANDSTFAAYRPCTKEVELSALES
NT seq 1602 nt   +upstreamnt  +downstreamnt
atggcggcgccgtcggcggccatgcgcaagaagctccagcgcaagttccggctcaggggc
ttcaccctcaaggtagacgccctcgaggaggcggccaccttcctcgcccgcttccccgac
gcggaggacgacgccctcgatctcctcctcgacgagctcgacaaggaaccgctgaaatcg
tctatactggacggggacgccgtccggcgcgtggtgtccctgcttgtcgaggcggaggag
gcggtcgacgcggcgtcgccggcggccaccagcgcccgttcggcgctgagggtggtggac
tcattcgtcgtgccgcggttccagtacgacccaatcaagaaagtgttctacgagcacact
ggcagattagcaattcatggagaagccagcgataaagctgccctttacagggataggtat
caagtgcttcttcagaggctcgctcgtgataaatatttctccaggccagcctttgagact
gtgatgactgaaaaggatagttgtgagataacttctatacagtctttaattgggtgcact
ggacggagatggattatgggggtcatatcgcagttggaggaacgtcagttctacttggag
gatcttactggagcagttccaattgacttatcaaatgcaaaaatcacttcgggttttttt
gttgaaaacactgtaattgtggcagaaggggaattgctttcaaatggcatcttccaggtc
aatacatgtgggtttcctccattagaggatagggaagcatcactttcactgcttatgggg
cttgatttctttggtggaggagtcataccaactgaagaaacactgagactgtcatcacta
gaaaataaggccgtaaacgacatgtttgtcatactttcagatgtttggctggacagtgct
gagactatggagaagttagctgtcgttcttgatggctatgacagtgttgaagtggttcct
tctctctttgttttaatgggcaatttctgctctcgaccttgcaatctggcattcaattca
tttgaagaactcagattgcagtttggaaagcttggtgagatgattgcagcccgaactagg
ctaaaggaacatagtcgttttctattcattcctggacccgatgatgcaggaccgtctaaa
gctctcccaaggtgtgcactcccgaagtatctgatcgaggaacttcagaagcatatccca
aatgctatattcgtaagcaacccctgcagggtgaggttttatacgcaagaaattgtgttt
ttccgacaagatctactttacaggatgcggcggtcatgtctgattccaccaacaacagaa
gaaacaagtgatccttttgaacatctagtagcaactatcacccatcagagtcatctttgt
ccattacctctcacggttcaacctatcatatggaactttgatcattgccttcgactgtac
ccgactcctcacacgatagtattgggcgatagaagtgaacagaaggccttcaaatataca
ggaatcacttgcttcaatcctggttcttttgcaaatgacagcaccttcgcagcctaccgt
ccttgcactaaggaggtcgaactttctgcattagagagctaa

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