Brachypodium distachyon (stiff brome): 100828222
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Entry
100828222 CDS
T01717
Name
(RefSeq) autophagy-related protein 13b isoform X1
KO
K08331
autophagy-related protein 13
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
100828222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100828222
03029 Mitochondrial biogenesis [BR:
bdi03029
]
100828222
Membrane trafficking [BR:
bdi04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100828222
Atg1 complex
100828222
Mitochondrial biogenesis [BR:
bdi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100828222
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Arb1
Motif
Other DBs
NCBI-GeneID:
100828222
NCBI-ProteinID:
XP_003576273
UniProt:
I1INA1
LinkDB
All DBs
Position
4:29861122..29866800
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AA seq
607 aa
AA seq
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MAAAASEPPMVEQVITEFFAKSLHIILESRSPYESSRSFMRPSPPSSPLSGSQPRDRWFN
LALRDCPAALENFDLWRQSNLEPLVIDIVMLHRDSSSSSTAEGGKIIERWVIQYETSKSG
IGSSHGSKNRKSRNSSSEDHSLYRRAYKGSTLLFRSLHLLVRLLPAYNLFRDLNSSGRIR
PLNLSHKISSFVEPFTRAEDAGMKHYAFVPIETLFGHLSLSVSYAPVLEVVAAPEPTRPM
PTELIPDYVGSPTTDFLRQFSSLPSDGIAPACAAMTRRHSWSIDHAARSSGSPSPSSMNS
EPRGRLQPHVLMHDNPQTARPHPNSTLSPRKKKGTGFEEYYPSPPLSPSPSRSPSASYPK
NPLFRYESAPVVIPTVRDGGGSALPPSPSLKGKHQLPSQSYNLTLSPDGNSNVGKDLVRF
GEYDNKKNLQKVLSSGKDDLGYFHGLKFTRTSSKLFIMDELDERELAFVWEDRDTIIDQL
NRAGISDSGGQGTNQDTGGSMTRTPAAAICALLGMLKTAQGLGESRPSIAAPPPPVPQES
SSVQRVMTEERCDTTAAPNSALLRARTAADALEELKKFKEIKESILGRAKASPRDAMEGQ
KPADRDP
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgctgcctcggagccgcccatggtggagcaagtgatcactgagttcttcgcc
aagagcctccacatcatcctggagtcacgctctccatacgaatcatcacgcagcttcatg
cggccctcaccgccgtcttcgccgctgtccggcagccagccgcgtgaccggtggttcaac
cttgctctccgagactgcccggccgcacttgagaacttcgacctgtggcgacagagcaac
cttgaaccactggttattgacattgtgatgctgcaccgtgacagtagcagcagcagcacc
gctgagggtggcaagatcattgagaggtgggtgatacagtatgaaaccagcaaatctggc
attggtagcagtcatggcagtaagaacaggaagtctaggaacagctcgtctgaggatcac
agcttgtacaggagagcatacaagggctcaacactgttattccggtcactgcatctgctt
gttaggctcttgccagcttacaatctcttcagggatctgaactcatctgggagaatccga
ccactgaacctgtcacacaagatatcatcatttgtcgaaccgttcaccagagcagaggat
gcagggatgaagcactatgcatttgttccaattgaaactctgtttggccacctgagcttg
tcagtttcttatgcccctgtgttggaggtggtggcagcaccagagccaaccaggcccatg
ccaacagagcttataccggattacgtcgggagccccacaacagacttcctgagacaattc
agttccttgccttcagatggcattgcacctgcttgtgctgcaatgaccaggcgtcacagt
tggagtatcgaccatgcagctagatcatcaggatcaccatctccttcttcaatgaattca
gaaccccgtggacgcctacagccacatgtgcttatgcatgataatcctcaaacagcacgc
ccacatccaaatagcacattatcccctaggaagaaaaaaggtacaggatttgaagaatac
tatccgtcaccacccttgtcaccatcaccatcccgttccccttcagctagctacccaaaa
aatcctttgttccgatatgagagtgctcctgtggttattcccactgtgagggatggcgga
ggtagtgcgctaccaccttctccatctttgaagggtaaacaccagctgccatctcaaagt
tacaacctgacactatctcctgacggtaactcaaatgtagggaaggatttggtcaggttt
ggtgagtatgacaataagaaaaacttgcaaaaggtgctatcttctggtaaagatgatttg
ggatattttcacggactgaagttcactcggacctcaagcaaactttttatcatggatgaa
ctggacgagcgagagttggcatttgtatgggaagatagagataccataattgatcaactt
aacagggctggcatctcggacagtgggggccaagggacgaaccaggacactggaggctcg
atgacgaggactccagcagcagccatctgtgctttgctgggtatgctgaagacggctcag
ggcctcggggaaagccgtccgtcgatcgcagctcctcctcccccagttcctcaagaatct
tcttcggtccagagggtcatgaccgaggaacgctgcgacaccactgctgcaccgaactct
gctctcctgcgagcaaggacggcagcggacgcgctggaggagctgaagaaattcaaggag
ataaaggaatcgatactcggtcgcgccaaggcctcgccccgggatgccatggaggggcag
aaacccgcggatcgagatccttag
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