Brachypodium distachyon (stiff brome): 100828224
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Entry
100828224 CDS
T01717
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100828224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100828224
Spliceosome [BR:
bdi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100828224
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
100828224
NCBI-ProteinID:
XP_010228422
UniProt:
A0A0Q3HE10
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Position
1:57260725..57266177
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AA seq
532 aa
AA seq
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MAMYTLRLSRSPPSPDSLLREAEGAGRRNLGGDGAAGLLHAGKTWAKIMASLADSFLADL
DELSDNEAYPEEDNAEAGGADEDSDDDMPDLESLNYDDLDSVSKLQKTQRYNDIMQKVEG
ALEKSTDLSNQGFILEEDPEYQLIVDCNALSVDIENELIIIHNFIRDKYRLKFPELESLV
HHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPLSEENLLKTIEAC
DRALNLDAAKKKVLDFVEGRMGYIAPNLSAIVGSAVAAKLMGIAGGLGALAKMPACNVQL
LGAKRKNLAGFSTATSQFRVGYLEHTEIFQSTPPALRTRACRLIAAKSTLAARIDSIRGD
PTGKAGRNLLEEIRKKIEKWQEPPPPKLPKPLPVPDSEPKKKRGGRRLRKMKERYAVTDM
MKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQNKLAAKVAKKFKEKSYGS
SGATSGLTSSLAFTPVQGIELSNPQAHGNHLGSGTQSTYFSETGTFSKIKRT
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggccatgtatactctccgtctctcccggtctcccccatcccccgattctcttctccga
gaagcagaaggagctggccggagaaatctcggcggcgacggcgctgcaggtctgcttcac
gcggggaagacttgggccaagatcatggcaagccttgctgattctttcttggctgatctt
gacgaactgtcagacaatgaagcctaccctgaagaagacaacgccgaggctgggggtgcg
gatgaggatagtgatgatgatatgcctgacctcgagtctcttaattacgatgatcttgac
agtgtttcgaagctgcagaagacacaacgttataatgacataatgcaaaaagtagaagga
gcacttgagaaaagcacagacttatctaatcaaggtttcatactagaggaggatccagag
tatcagcttattgtcgattgcaatgctttatcagtagatattgagaatgagctcattata
atccataatttcatacgtgacaagtataggctgaagtttcctgaactggaatcccttgtt
catcatccaattgattatgcccgtgttgttaagaagatcggaaatgaggtggacttaact
cttgtagatctggaagggcttttaccttctgcagttataatggttgtctctgtgacagca
tcaacaactagtgggaagcccctttctgaggagaatttgttaaaaaccattgaagcatgt
gacagagctcttaatcttgacgctgcaaaaaagaaggtgcttgattttgtagagggcaga
atgggttacatcgcaccaaacctgtctgccattgttggcagtgctgttgctgcaaaactg
atgggaattgctggtggtttgggagcacttgcaaaaatgcctgcttgcaatgttcaatta
ctcggagcaaagaggaaaaatcttgctggattttctactgccacatctcagtttcgtgtt
ggctatcttgagcacactgaaatatttcagagcacccctccagccctgaggacccgtgct
tgcagacttatagctgcaaagtcaactctagcagcaaggattgattcaattagaggtgat
ccaactggaaaagctggtcggaacttgttggaagaaattcgtaagaagatcgagaagtgg
caagaaccacctcctcctaagcttccaaaaccacttcctgttccagactctgagcctaaa
aagaaaagagggggccgccgccttcgaaaaatgaaggaaagatatgcggtgactgatatg
atgaagcttgcaaaccgaatgcaatttggtataccggaggagagctcattaggtgatggc
ttgggtgaaggttatggcatgcttgggcaggccggtagtggaaaactacgcgtgtcagct
gcgcaaaacaaacttgctgctaaagtggccaagaaattcaaggagaagagctatggtagc
agcggcgcgacatctggactgacatctagtttggccttcacaccagttcagggaatagag
ctgtcgaacccgcaggcccatgggaatcatcttggaagtggtacccagagcacctatttc
tccgagaccggcacattctcaaagatcaaaaggacctga
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