Brachypodium distachyon (stiff brome): 100828290
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Entry
100828290 CDS
T01717
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdi03016
]
100828290
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
100828290
Transfer RNA biogenesis [BR:
bdi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
100828290
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GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
Motif
Other DBs
NCBI-GeneID:
100828290
NCBI-ProteinID:
XP_003569029
UniProt:
A0A0Q3G8N0
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Position
2:complement(37879744..37886307)
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AA seq
783 aa
AA seq
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MRPSPMAARAASGCCCCSPAVALAFSRLRPLLSRAAVRQGPAAAATGGRFALSTTSRGRL
VDSVLEELRSSRRAARFSARIGLHGTKQLSDIKIDKRTLQKGWLLEFHKDSERSLLAVVE
RPDGKKNWVVTDQNGILSSIKPQQVTYVVPGTMNFDSSKIAEFLEKAQDLLDPTVLECAW
MELSEKGKSVTVDEFADIVYGSKESLESYCAHFLLSRDIVYFVKVESRDSSMYQPRPSAQ
VDELLRRKLAKEAAEKELEEFVHLLKSAKALPLDSKPPKNSWLMEDKVKQKMESLQAYAV
DACDDEQRRMAGNILKAMGFSRTSSAALKLLINVGYFPVHVNLDLFRYDVQTSYSEKVLS
VADELLADCPDSDKHIRKDLSTLKVYAIDVDEADELDDALSATRLPDGRIKVWIHVADPT
CFLQPRSIIDREAMHRGTSIFLPTATYPMFPERLAMNAMSLQQGTDCRSVSVSVILNPDG
SIAEYKIENSVIKPTYMLTYESATELLYMNLEEEEELRILREAASIRAQWRCSQGSIDTA
MIEPRIKVANPDDPEPNINLYVEDQTNPAMQLVSEMMILCGEAVASFGSDNDLPLPYRGH
PQNNTAVSAFAYLPEGPARSFASIALLRAAEMDFRKPVAHGVLGIPGYVQFTSPIRRYVD
LLAHYQVKAFLRGESPPYSAGDLEGMTFIASMHVKVARKLHSNSLRYWLLEYLRRQPKGR
KFKALILKFIKDRMATLLLVEVGIQATTVVAAGKVGDEVSVVVEMAHPRDDILSVTEIAE
DTE
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgtcgcccatggcggcgcgggccgcaagcgggtgctgctgctgctccccggcg
gtggcgctggccttctcccgcctccggcccctcctcagccgcgccgccgtccgccagggc
cccgccgccgcggccaccggcggccgcttcgcccttagtaccacctcccggggccgcctt
gtcgactccgttctggaggagctccggtcctcccggagggctgctcgcttctcggcaagg
ataggattgcatggcacaaagcaactgtcagacatcaagatagataagagaaccttacaa
aaaggatggttgcttgaatttcacaaagattctgagagatcattgcttgcagttgtagaa
aggcccgacgggaagaaaaactgggtagtcactgaccagaatggtatcttatcttctata
aagccccagcaggttacatatgttgtacctggtaccatgaatttcgattcttcaaaaata
gctgaatttctcgagaaagcgcaagatcttttggaccctactgttctggaatgtgcctgg
atggagctttctgagaagggcaaatcagtaacagttgatgagtttgcagatatagtttat
ggtagcaaggaatctttggagagctactgtgcacacttcttgttatcacgggatattgta
tattttgtgaaggtggagagcagagattcttccatgtaccagcctcgcccgtctgctcag
gtggatgaacttttacgacggaaacttgctaaagaggccgccgagaaggaactggaagaa
tttgtccacctactcaagtccgccaaagcattgcctctggactctaagcctcctaaaaat
tcttggttgatggaagacaaagtgaaacaaaaaatggagtctcttcaggcatatgcagtt
gatgcgtgtgacgatgaacaaagaagaatggcaggaaatattctcaaggctatgggattc
tcacggacttcatcagctgccctgaagcttcttataaatgttggatacttccccgtgcat
gtcaatctcgatctttttagatatgatgttcaaacctcgtacagtgagaaagttctatct
gttgctgatgagcttctggccgattgccctgattcagataagcacattcgaaaagatctt
tcaactttgaaagtttatgccattgatgtggatgaggctgatgaacttgatgatgcacta
agtgcaactagactacctgatggtaggataaaggtctggatacatgtagctgacccaaca
tgctttcttcaaccccggagtatcattgacagggaggcaatgcacagaggaacctcgatc
tttttaccaactgccacctatccaatgttcccagagaggcttgccatgaatgctatgagc
ttgcaacagggtacagattgtagatctgtaagcgtatctgtgatcttgaatccagatgga
agtattgcagaatataagatagaaaattcagtaatcaaacctacctacatgttaacatat
gagagtgcaactgaattgctgtacatgaacctggaagaagaggaagaactgaggattctt
cgagaagctgcttcaattcgtgcacaatggcgatgcagccagggttcaatcgacactgct
atgatagaacctcgtatcaaggtggcaaatcctgatgatcccgaaccaaacattaatcta
tatgttgaagaccaaacaaacccagcaatgcagcttgtatcagagatgatgatactttgt
ggggaggcagtggcttcttttggttctgacaacgatcttcctttaccatacagagggcat
ccccagaataacacagctgtgtcagcatttgcctatctacctgaagggcctgccaggagc
tttgccagtatagctctgctccgtgctgctgaaatggattttcggaaacctgtagcacat
ggtgtccttggtattcctggttatgtgcagttcacctcccctattagaagatatgttgat
ctgctagctcattatcaggtaaaggcttttcttagaggtgaatctccaccatattcagct
ggtgacttagaaggaatgacatttattgcgagcatgcatgttaaagtagctcggaagctc
cacagcaacagcttacgttactggttgttggaatacttaaggagacagccaaaggggagg
aagtttaaagcactgatacttaagttcattaaggatcgtatggcaactttgcttttggtg
gaggttgggatccaagccacaaccgtagttgcagctgggaaagttggagatgaagtaagc
gtggttgtggaaatggctcatccccgtgatgacatcttatcggttacggagattgcagaa
gatacagagtag
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