Brachypodium distachyon (stiff brome): 100828500
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Entry
100828500 CDS
T01717
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
100828500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100828500
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
100828500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
Motif
Other DBs
NCBI-GeneID:
100828500
NCBI-ProteinID:
XP_003571218
UniProt:
I1HZN3
LinkDB
All DBs
Position
3:8895457..8898179
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AA seq
707 aa
AA seq
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MPRPTFSSGRPPSSAEADPGSNPHLSSTPDSSIASLIERATCTTAPSVDPALLRAIKSSA
RSSDGAIRDGFRLLLSLMAKPHSHVRLLAFSIVDELFMRSKLFRSLLADSLDGFLPLAVG
FRHQLPPPAASATTLRKAAVQALERWHHLFGAHYRQLRLAVEYLKESARIRFPGIHAAVE
ARAAREARTQEILTGKIEQLRQNIGSIKAEIRSTIDEIRNGLAIIRAEYDKFEAYVDDDE
EQEIASLEMRSIRIASLMAGEWVPETQENEAVFDALRESCRLLISKHLGTVQEWISVLVR
VNLVDNRFRDSALKEFIDVKNEIRAVRDQCSELGLNLDNVHRKKDVQEDEDDEIWVEGNI
EVSSPARIESSVDVASSSKDARKGKRVEVSVNSGNDEAPNAGKRSQEMDPGRARLLAEAR
VVPWSSVLDRWGSNGDAHVNQRGLEFDGHWGRMDNDAVIPAAKIAELNVHSSVYKEEPTE
ILPCHAPLKKGGLCQRRDLKVCPFHGPIVPRDAKGNPIGQSNGNCNTGGEPIEQNGGMCD
AGGNLVETNGSTDGEYTQEPSPSGMINRNNDKWSMHGGHDLDKITMEQLARHAIKNVRKR
DIDDKAREKAQRARIRQHNEDVLREAAIASTSHSAAEYDQPSEVLGRRGRRRGKTKEPTL
ASMLKKKVTTKDRITERLLNARARDATIREVSKNEDMSYREAFPNQW
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtccgacgttctcctccggccggccgccgtcgtcggcggaagccgacccaggc
tcgaatcctcacctctcctcgacgccggattcctccatagcgtccctgatcgagcgcgcc
acctgcaccaccgctccttccgtcgaccccgccctcctccgcgctatcaagtcctccgct
cgctcctccgacggcgccatccgcgacggcttccgcctccttctgtccctcatggccaag
ccccactcccatgtgcggctcctcgcctttagcatcgttgacgagctcttcatgcgctcc
aagctgttccgatccctcctcgccgactcgcttgacggattcctcccactagccgttggc
ttccgccaccagctcccgccgcctgctgcatccgccaccacactccggaaggcagctgtc
caggcactcgagcgctggcaccacctgttcggtgcgcactaccgccagctgcgcctcgcc
gttgagtacctcaaggagtctgcgcgcatccggttccctggcatccacgcagctgtggag
gcccgtgctgcacgggaggcacgtacgcaggagatcttgactggcaagattgaacagttg
cgccagaatattggatccataaaggctgagatccggtccacaattgatgagattcgcaac
gggttggccatcatccgtgctgagtatgataaatttgaggcttatgtagatgatgatgag
gagcaggagattgcttcattggagatgcggagtattaggatagcgtcattgatggctggg
gaatgggtgcctgagactcaggagaatgaggcagtgtttgatgcattgagggagtcatgt
cggctccttatatcaaaacatcttggcactgttcaggagtggatatctgtgcttgttagg
gtcaatcttgtggataatcgtttcagggattctgcgctgaaggaattcatcgatgttaag
aatgagatacgtgcagttagagaccagtgtagcgagcttggtctaaatcttgataatgtt
cataggaagaaggatgttcaagaggacgaggatgatgaaatctgggtggagggaaacata
gaagtatctagccctgctagaattgagagcagtgtagatgttgcaagttccagcaaggac
gctagaaagggaaagagggtagaggttagcgtgaattctggtaatgacgaggcgccaaat
gctggtaaaagatctcaggagatggatccagggagagcaaggctccttgctgaagcccgt
gtggtaccatggagttctgtcttggacaggtggggttcaaatggggatgcacatgtcaac
cagagagggcttgagtttgatggccattgggggaggatggataatgatgctgttatacct
gcagcaaagattgctgagttaaatgttcacagttcagtttataaagaagagccaactgag
atcctaccatgtcatgcacctctgaagaaaggaggtctttgccagagaagggatctcaag
gtatgcccttttcatggacccatcgtcccacgtgatgcaaaaggaaatccaattggtcag
agtaatggcaattgtaatacaggaggagaacccattgagcagaatggaggcatgtgtgat
gccggaggaaacctggttgagacaaatggaagcactgatggtgaatatacgcaggagccc
tctccttcaggaatgataaacagaaataatgacaaatggagcatgcatggaggccatgat
cttgataaaattacaatggaacagctggctaggcatgcaattaagaatgtccggaaaagg
gacatcgatgataaagcacgcgaaaaagcccaacgtgctagaattcgtcagcataatgaa
gatgttttgcgggaagcagctattgcttcaacatcccactcagcggcagaatatgaccag
ccttctgaagtactgggtcgacggggtcgacgtcgaggtaaaacgaaggaaccaacgcta
gcatcgatgttgaagaaaaaggtcactaccaaagataggatcacagagaggcttctaaat
gctcgagctagggacgcaaccataagagaagtttcaaagaatgaggacatgagctatagg
gaagcattcccaaatcagtggtaa
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