Brachypodium distachyon (stiff brome): 100828512
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Entry
100828512 CDS
T01717
Name
(RefSeq) chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X2
KO
K27707
chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100828512
Spliceosome [BR:
bdi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100828512
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CRS1_YhbY
DUF3970
Spc24
Motif
Other DBs
NCBI-GeneID:
100828512
NCBI-ProteinID:
XP_003573775
UniProt:
I1I370
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Position
3:21111319..21115958
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AA seq
730 aa
AA seq
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MAPPPLPLFSPSPKPPPPPPWLHGPKTPTSATPPLPIEAPPKPHNDPKPQRSNSSTTNPL
TTGVPGGRTRRAVLGIIRRVRSLELSNPPNPRPRPSTSGNIPFHLPIDRPQEGQEEEEAG
KDEKGKLTKSRAVPWSAARDEHLKVVLRREKKVREPTRAERELGPALLERLRRAARGMDR
WARAKKAGVTDEVVEDVRSEWSSGQELAGVRIVEPLRRCMDRAREILEIKTGGLVVWTKG
DIHFVYRGSDYVHNMKYSHNFVADIQKVRTPQEKYKSNVELLGKHNGKAKGAFREKDSSI
DIQTYEEPVKGTLYEREVNRLLDSLGPRFIDWWWNTPLPVDADLLPEVVLGFKTPFRQCP
PGVRPTLADEELTYLRKLARPLPAHFALGRNTKLQGLAAAILKLWEKSLVAKIAVKVGIE
NTNNEQMAWNLKHLTGGTIILRNKDFIILYRGKDFLPAGVKQSVIQHEAQVDAQQVKEEE
ARLSGTESLQMFAGLPSVESSAGTFREYQDFQVNQAHETTINNKAMIELEAEKHRLEKEL
KDQERRLFILTKKIERSNQALAKLHSSWNPSEQSADKELLTEEERMIFRKIGLKMDEHVL
LGRRGVFDGVIEEIHQHWKHKEIVKVITKQNQSYQITYTSMLLEVETGGVLIATQKLPHS
HAIILYRGKNYRRPEKSPSNLLTKREALRRSVEVQRRGSMKYYVWERQKSIEELQWRLAN
VAREIRKLTP
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacctccacttcccctcttctccccctcgccgaagccgccgcctccaccaccg
tggctccacggccccaaaacccccacttccgcgacccctccactccccatcgaggcccct
ccgaagccccacaatgaccccaagccgcaaagaagcaacagctccaccaccaatcccctc
accaccggcgtccccggaggccgcactcggcgcgccgttctaggaatcatccgccgagtc
cgttccctcgagctctccaacccgccaaaccctagacccagacccagcactagcggcaac
atccccttccacctcccaatcgaccggccgcaggaaggccaagaagaagaggaggcgggg
aaggatgagaaggggaagctgaccaagtctagggcggttccgtggtctgcggcgagggac
gagcatctcaaggtcgtgctgcggcgggagaagaaggtgcgggagccgacgcgcgcggag
cgggagctggggcccgcattgctggagcggctccggcgcgcggcgcgtgggatggacagg
tgggcgcgggccaagaaggccggggtgacggacgaggtggtggaggatgtgcggagcgag
tggtcgagtggccaggagctcgccggtgtgaggatcgtcgagccactccggcggtgcatg
gacagggcaagggagatccttgagataaaaacaggaggcttagttgtgtggacaaaagga
gacatccattttgtttacagaggaagtgattatgtacataatatgaagtattctcacaat
tttgtagcggacattcagaaagtccgtacgccacaagaaaaatacaaaagcaatgttgag
cttttaggcaagcataacggtaaagctaaaggtgctttccgagagaaagattcaagcatt
gatattcagacatatgaagagcctgtcaagggaacgctctatgagagagaagtcaacaga
ttgttagacagtttgggccctcgatttattgattggtggtggaacacaccattgcctgtg
gatgctgatctccttccagaagttgttctaggcttcaagactccatttagacaatgccct
cctggcgtgagaccgacactagcagatgaggaactaacatacctccggaagcttgcacgc
cctttgccagcacattttgctctaggtagaaatacaaagctacagggtttggctgctgct
atactaaagctttgggaaaagagccttgtagcgaagattgcagtgaaagtgggtatcgaa
aataccaataatgaacaaatggcatggaatcttaagcatcttactggaggaactatcata
ctgagaaacaaggacttcattattctatatagaggcaaggattttcttcctgctggggtt
aaacaatctgttattcaacacgaagctcaggtagatgcccagcaggtgaaggaagaagaa
gcccgattatcagggactgagtcacttcagatgttcgctggtttaccctctgtggaaagt
tctgcaggaactttcagagagtatcaagattttcaggttaaccaggcacatgaaacaact
ataaacaacaaggctatgatagaactagaggctgagaagcataggctggagaaggaactg
aaagaccaggaacgaagacttttcattcttaccaagaagattgaaagatctaatcaagcg
ctggcaaagcttcatagttcttggaacccttcagagcaatctgcagacaaagaactcttg
acagaggaggaaaggatgatattccgaaagattggcctaaaaatggatgagcatgtgctc
cttggcagacgtggtgtttttgatggtgttattgaagagattcatcaacactggaagcat
aaagagattgtgaaagtaattaccaagcagaatcaatcttatcaaataacatatacatcg
atgctgcttgaggttgagacagggggagtattgatagcaacacagaagctcccacacagc
catgccataatactttaccgtgggaaaaattatcggcgcccagaaaaatcacccagcaat
ctcctgactaaaagagaagcattacgaagatcagttgaggttcagcgacgagggtcaatg
aaatattatgtttgggagagacaaaaatccatcgaggaattacaatggaggctggcaaat
gtggcaagggagatcaggaaactaaccccgtga
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