Brachypodium distachyon (stiff brome): 100828554
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Entry
100828554 CDS
T01717
Name
(RefSeq) E3 ubiquitin-protein ligase RING1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100828554
04121 Ubiquitin system [BR:
bdi04121
]
100828554
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100828554
Membrane trafficking [BR:
bdi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100828554
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100828554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-C3HC4_3
zf-FPG_IleRS
zf-RING_5
Zn_ribbon_6
zf-Nse
UBZ_FAAP20
Prok-RING_1
zf-RING-like
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
100828554
NCBI-ProteinID:
XP_003560936
LinkDB
All DBs
Position
1:44554353..44555821
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AA seq
335 aa
AA seq
DB search
MSAPGVHYGLPRHRRRWRLYWCYVCRRALRTVVSSPTSDVFCPRCLGRFLHEIDLPPMPR
GAPTTHPHPTPTAEHEQLLQPPFLPYEPPRRWIIYAGGDGAADAPRARPRRVPSPPPAPR
TRRMHGADADADAGPRADIVDPSEFFTGPDLNALIEGLTQNDRPGPAPAPASAIDALPTV
RVSPAHLSSDSQQCPVCKEEFELGEAARELPCKHAYHSECIVPWLRLHNSCPVCRQELPV
PDGGTNGDGGGVERRGGEGEEPPEPGQVLAGWGPLAWLLLLGQMGADGLEHRHGGRERGE
ADADDAGGNGGSSAPTILQSFVLVAACFLFASFLL
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgcccggcgtgcactacggcctcccgcggcatcggcggaggtggcgcctgtac
tggtgctacgtgtgccgccgcgcgctgcgcaccgtcgtctcctccccgacctctgacgtc
ttctgcccgcgctgcctcggccgcttcctccacgagatagacctgccgccaatgccccgc
ggggcgcccacgactcacccgcacccaacgcccacggccgagcacgagcagctcctccag
ccgcccttcctcccgtacgagcctccccgccgctggatcatatacgccggcggagacggc
gcggccgacgcgccccgtgcgcgcccgcgccgtgtcccgtccccgcccccggcgccgagg
acacgacgaatgcacggcgccgatgccgatgccgatgccggtccacgggcggacatcgtc
gacccgtcggagttcttcacggggccggacctgaacgcgctcatcgaggggctcacgcag
aacgaccgcccgggccccgcgcccgcgccggcgtcggccatcgacgcgctcccgacggtg
cgcgtctcgcccgcgcacctgtcctcggactcgcagcagtgccccgtgtgcaaggaggag
ttcgagctcggggaggccgcgcgggagctgccgtgcaagcacgcgtaccactccgagtgc
atcgtgccgtggctccggctccacaactcgtgcccggtctgccgccaggagctgccggtg
ccggacggcggcactaatggcgacggcggcggcgttgagagaagaggcggggagggggag
gagccgccggagccggggcaggtgttggccggctggggaccgctggcttggctgctgttg
ctggggcaaatgggcgcggacggcttggagcataggcatggggggcgcgagaggggagaa
gcggatgccgatgatgcaggcggcaacggaggttcaagtgcccccacgatcctgcagtcg
tttgtgctcgtcgccgcttgctttctcttcgcctcttttcttctttaa
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