Brachypodium distachyon (stiff brome): 100828610
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Entry
100828610 CDS
T01717
Name
(RefSeq) protein mago nashi homolog 2
KO
K12877
protein mago nashi
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03013
Nucleocytoplasmic transport
bdi03015
mRNA surveillance pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100828610
09122 Translation
03013 Nucleocytoplasmic transport
100828610
03015 mRNA surveillance pathway
100828610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100828610
03041 Spliceosome [BR:
bdi03041
]
100828610
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100828610
Spliceosome [BR:
bdi03041
]
Complex C
Other components
EJC/TREX
100828610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
100828610
NCBI-ProteinID:
XP_003573269
UniProt:
I1I0C2
LinkDB
All DBs
Position
3:11792053..11795369
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AA seq
164 aa
AA seq
DB search
MAAAVGGAGNGAGEEAGGAEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDT
MIRKEVFVSPSVLREARRIIQDSEIMREDDNNWPEPDRVGRQELEIVMGNEHISFTTSKI
GSLVDVQTSKDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggtcggcggcgcgggcaatggagccggcgaggaggccggcggcgcggag
ttctacctgcgctactacgtggggcacaagggcaagttcgggcacgagttcctcgagttc
gagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgacacc
atgatccgcaaggaggtcttcgtctccccctccgtcctccgcgaggccaggaggatcata
caggactctgagatcatgagggaggacgacaacaactggccggagcccgaccgggtgggc
aggcaggagctcgagattgtcatgggcaacgagcacatctccttcaccacctccaagatc
ggctcccttgttgacgtccagaccagcaaggaccccgagggcctccgcatcttctactac
ctcgtccaggacctgaagtgttttgtgttttcacttatcaacctccactttaagatcaag
cctattcaatcctga
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