KEGG   Brachypodium distachyon (stiff brome): 100828715
Entry
100828715         CDS       T01717                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A0 isoform X2
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100828715
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bdi03019]
    100828715
   03041 Spliceosome [BR:bdi03041]
    100828715
Messenger RNA biogenesis [BR:bdi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     100828715
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100828715
Spliceosome [BR:bdi03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    100828715
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 RRM_Nup35
Other DBs
NCBI-GeneID: 100828715
NCBI-ProteinID: XP_003574688
UniProt: I1I860
LinkDB
Position
3:complement(41239532..41243406)
AA seq 359 aa
MGKADARPREHGSGGGGNGSPGKIFVGGLPRDTTPAVFQKHFGQYGEIIDSVIMKNKHTS
QPRGFGFITYADPAVVDHVMEDSHVINGKQVEIKRTIPKDSMQSNPRDFKTKKIFVGGLP
STLTEDDFKDFFEKYGTVVDHQIMRDHQTRRSRGFGFVVFCSEQVVDDLLANGNMIDLAG
SKVEIKKAEPKKSSNPPPSGGSDSRSAYSRDSRDRPSGNDHGGLAGGYNSFNGGGFGPYR
NLGAFGGSLGGHGGVGDYHGRYGRYYAGLGGYEGMSSFGYPSRFAPYGGGFDGPYAGGNF
SGYRRGGDESFGGPGSSSFGGGMYGGPYDPALGGYGPGSTPDMNRGSFGGASGRYHPYG
NT seq 1080 nt   +upstreamnt  +downstreamnt
atggggaaggctgacgcgagacccagggagcacggcagtggcggcggcggcaacggaagc
cccgggaaaatcttcgtcggagggctcccgcgcgacaccacaccagccgtatttcagaag
cattttggacagtatggagagataattgattcagtgataatgaagaataagcacacatct
caaccaaggggttttggctttattacttatgctgaccctgctgttgttgatcatgtgatg
gaggacagccatgtcatcaatggaaagcaagtcgagattaagagaaccattccaaaagat
tccatgcagtccaaccccagggatttcaaaaccaaaaagatatttgttggtggccttccc
tcaacactaacagaagatgattttaaggatttcttcgaaaaatatggaactgtggttgac
caccaaattatgcgtgatcatcaaacaagacgctcccgaggcttcggatttgtagttttt
tgttctgagcaagttgtagatgatttgttagcaaatgggaatatgattgatcttgctggt
tcaaaggtggagatcaagaaagcagaaccaaagaaatcctcaaacccaccaccatcaggt
ggtagtgattctagatcagcatattctagggattctagggaccgtccttctgggaatgac
catggtggactggctggtggttataacagcttcaacggtggtggatttggtccttataga
aaccttggagcttttggtggtagtcttggtggtcatggtggggtaggtgattaccatggt
cgatacggtcgttactatgcaggattaggaggctacgaaggcatgtcttcctttggttat
cctagccgctttgcaccatatggaggaggttttgatggaccttatgctggagggaacttt
agtggctacaggcgtggtggtgacgagagctttggtggccctggtagttctagctttggt
ggcggcatgtatggtgggccatatgatcctgcactaggtggttatggacctggcagcaca
cctgacatgaataggggaagctttggcggtgcttcaggccgataccacccatatggctga

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