Brachypodium distachyon (stiff brome): 100828809
Help
Entry
100828809 CDS
T01717
Name
(RefSeq) E3 ubiquitin-protein ligase RZF1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100828809
04121 Ubiquitin system [BR:
bdi04121
]
100828809
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100828809
Membrane trafficking [BR:
bdi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100828809
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100828809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING-like
zf-Nse
Prok-RING_1
zf-RING_16
VPS18_RING_C
zf-C3HC4_3
Zn_ribbon_6
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
100828809
NCBI-ProteinID:
XP_014756786
UniProt:
A0A0Q3FUL5
LinkDB
All DBs
Position
3:complement(57279752..57282029)
Genome browser
AA seq
328 aa
AA seq
DB search
MMPSAHGGGVRQRTCRMYWCYACGRALRIISYPATDVFCPRCFGRFLHEIDPPPRPAPPL
LLHPPGFFAPPQHFAPHYDAQHRRWVVYGSAGPGAAPTVPGRAFRQPAPSPAPAHPPRQR
MPSPPPVARRRPSTPPAIDPGDYFTGGDMNLNSLVEELTQNDRPGPAPAAASAIDSLPTV
RITATHMADGSQCPVCKEEFELGEAARELPCKHAYHSDCIMPWLRLHNSCPVCRSQLPGA
GASGSNVAGRSHAAAQRRGGSNGGGREREPQGTMVRWGPLSWMWPPRGMEDPDDEWEYGR
HGHGRGHGRPEAGDAGAFYAWWRSLFLL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgatgccatcagcgcacggcggcggagtgcggcagcggacgtgccgcatgtactggtgc
tacgcgtgcgggcgggcgctgcgcatcatctcgtacccggccaccgacgtcttctgcccg
cgctgcttcggccgcttcctccacgagatcgacccgccgcctcgccccgcgcctcctctg
ctcctccatccaccgggcttcttcgccccgccgcagcacttcgcgcctcactacgacgcc
caacaccgccgctgggtcgtctacggcagcgccgggcccggtgccgcgcccacagtcccc
ggacgcgccttccgccagcctgcgccatcaccggcaccagctcatccgcctcgccaacgc
atgccttccccgccgccggtggcgcggcggcggccgtcgacgcctccggcgatcgacccg
ggggactacttcacggggggagacatgaacctcaacagcctggtggaggagctgacccag
aacgaccggccgggtcccgcgccggcggcggcgtccgccatcgactcgctccccacggtg
cggatcacggccacgcacatggcggatggctcgcagtgccccgtgtgcaaggaggagttc
gagctcggggaggcggcgcgggagctgccgtgcaagcacgcgtaccactccgactgcatc
atgccctggctccggctccacaactcatgccccgtctgccgctcccagcttcccggcgcc
ggcgcgtccggctccaatgttgccggcaggagccatgctgccgcgcagcgacgcggtggt
agcaacggcggagggagggagagagagccgcaggggacgatggtgaggtgggggccgctg
tcgtggatgtggccgccgcgtgggatggaggatccggatgacgaatgggagtatgggcgg
catgggcacgggcgcgggcatggcaggcccgaggcaggcgacgccggcgcattctatgct
tggtggcgctctctgtttctcctctag
DBGET
integrated database retrieval system
