Brachypodium distachyon (stiff brome): 100828839
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Entry
100828839 CDS
T01717
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11 isoform X2
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03020
RNA polymerase
bdi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100828839
09124 Replication and repair
03420 Nucleotide excision repair
100828839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100828839
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100828839
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
100828839
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100828839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
PspAA
Glyco_transf_99
Motif
Other DBs
NCBI-GeneID:
100828839
NCBI-ProteinID:
XP_003578343
UniProt:
I1IRC8
LinkDB
All DBs
Position
4:complement(39555631..39568360)
Genome browser
AA seq
119 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSFEKDTKIMNAASFTIEREDHTIGNILRMQLHRDPNVLFAG
YKLPHPLQYKIIVRIHTASQSSPTQAYNQAINDLDSELENLKQAFEDEKNRFEERKQPY
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctcctgaccgctatgagcgttttgttgtgcctgagggcacaaagaaggtgtca
tttgagaaggatacgaagattatgaatgctgcatcattcacaattgaacgtgaggaccac
acgattggcaacatcctccgcatgcagctgcacagggacccaaatgttctctttgctggc
tataagctccctcacccccttcagtacaagatcatagttaggatccatactgcaagtcag
tcctctccgacccaggcatataaccaggcaatcaatgatctagacagtgagcttgagaac
ctgaagcaggcttttgaggacgaaaagaatcggttcgaggagaggaagcagccctactag
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