Brachypodium distachyon (stiff brome): 100828896
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Entry
100828896 CDS
T01717
Name
(RefSeq) TBC1 domain family member 15
KO
K20168
TBC1 domain family member 15
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100828896
Membrane trafficking [BR:
bdi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100828896
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
RabGap-TBC_2
DUF8462
Motif
Other DBs
NCBI-GeneID:
100828896
NCBI-ProteinID:
XP_003570212
UniProt:
I1ID39
LinkDB
All DBs
Position
3:complement(53577660..53585970)
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AA seq
677 aa
AA seq
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MRGEAAADAGAGYPRSPEPHDLSDDSDYAAAAAASASIHAAIRSDMADIGSEETARVDVV
YEKERVTIHPTQYGSSRISGKLRLYLQLGALFLSWEPNEGVDSFSTSSVTAEIEKYRNLY
TIQALPVSDIRFIRRYNPTFGLEYIIIVLSSGLAFPPFYFYNGGTRELFATMKQHVFIIR
SDDDPTLFLVNDFEDPLQKSLSSLELPGVATVANAMSRQNSFSFAGSVNEARHGDDAKHG
GPSSIYEYGSKQKHKLNDPGRDLSLQVLEKFSLVTKFARDTTSSLFRENHSSGSHAYGRQ
KQEHVWDNRISDKYKDQQITQDDTSVLSDSTESDELLLVWGKKRGSPLTVDEWRAFLDPE
GRIMDSKALRKKVFYGGVDHVLRKEVWKFLLGYHEYDSTQAEREYLAAMKREEYEAIKSQ
WKSISATQAKRFTKFRERKGLIDKDVVRTDRAVPFYEGDDNRNVVVLRDILLTYSFYNFD
LGYCQGMSDFLAPILHVMEDESESFWCFASLMERLGGNFNRDQNGMHAQLLALSKLVELL
DPPLHNYFRQNDCLNYFFCFRWVLIQFKREFSFDQIMLLWEVLWTQYLSEHFHLYLCVAI
LKRYRQRIIGEGMDFDTLLKFINELSGQINIDQAIQDAEALCTIAGDNGAACIPPGTPPS
LPVETDGGLYLQEDDVL
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggggaagcagcagcagacgccggggcgggctacccgcgctcgccggagccccac
gacctctccgacgattcagactacgccgctgccgccgccgcctccgcttccatccacgcg
gcgataaggagcgatatggccgacatagggtctgaggagactgcgagggtggatgtggtg
tacgagaaggagcgtgtgacgatccacccaacgcagtatggctccagccggatcagcggg
aagctgcgcctctacttgcagctgggcgctctgttcctgagttgggagccaaatgaggga
gttgattctttctcaaccagttcagtcaccgcggaaatagaaaaatatagaaatttgtac
accatccaggctttgcctgtaagtgacatacgcttcatccgtcggtacaacccaacattt
ggattggagtacataatcattgttctctcatcaggcttggcttttcccccattctacttc
tacaacggtggaactcgtgaattgtttgcaacaatgaagcaacacgtcttcattatcagg
tcggatgacgatcctactttatttcttgtcaatgactttgaagatcctcttcagaaaagc
ctgtcatctctggagcttccaggggttgccactgtggcaaatgccatgtcacgacagaat
tcgttcagcttcgctggttcagttaatgaagctaggcatggggatgatgccaaacatggg
gggccttctagcatatatgaatatggttcaaagcaaaagcacaaattgaatgatccaggt
cgtgatctttcgcttcaagttttggagaaattctcactggttacaaagtttgctcgcgac
acaacatcgagtctctttcgggaaaatcatagtagtggttctcatgcttatggacggcaa
aaacaggaacatgtttgggacaacagaataagcgataaatacaaagatcagcaaataaca
caagatgacacttctgtgctctcagattcgacagagtctgatgagttgctgctagtgtgg
ggtaaaaagagaggcagcccattaaccgtcgatgagtggagagctttcttagatcctgaa
ggtagaattatggattcaaaggcactgaggaaaaaggttttctatggcggtgttgatcat
gtccttagaaaggaggtctggaaattcttgttggggtatcatgaatatgattcaacacaa
gctgagagggaatatcttgctgccatgaaacgagaagaatacgaagccattaaatcccag
tggaagagtatctcagccacgcaagctaaaaggttcaccaagtttagggaaagaaaaggc
cttattgacaaggacgtggtgagaacagatagggctgttccgttctatgaaggggatgac
aatcggaatgttgtagttctacgtgacatcttgttgacatattccttctataattttgac
cttggttattgtcaaggaatgagtgattttttggcacctatacttcatgtcatggaagat
gagtcggaatcattttggtgctttgcttctctgatggaacgactaggaggaaattttaac
cgtgaccagaatggcatgcatgctcaacttcttgcattgtcgaagcttgtggagcttctc
gatcctccattgcataactattttaggcagaatgactgtttgaactacttcttctgtttc
cgttgggttcttatacaattcaaaagggagttcagttttgaccagatcatgcttttgtgg
gaagttttgtggactcaatatttgtcagaacatttccacctgtacttgtgcgtcgctatc
ttgaaaaggtaccgtcagcggataatcggggaagggatggacttcgacacccttctcaag
ttcataaatgagctcagtggtcagatcaatattgaccaggctattcaggatgcagaggca
ttatgtaccattgcaggtgataacggggccgcttgcattccacctggaaccccgccttct
ttgccggtcgagactgatggtggcctgtacttacaagaagatgacgtcttgtga
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