Brachypodium distachyon (stiff brome): 100828979
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Entry
100828979 CDS
T01717
Name
(RefSeq) titin homolog isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100828979
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
100828979
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerA
Motif
Other DBs
NCBI-GeneID:
100828979
NCBI-ProteinID:
XP_014754620
UniProt:
A0A0Q3ISE0
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All DBs
Position
2:complement(5452693..5470766)
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AA seq
1140 aa
AA seq
DB search
MLRSTRRRSRKHERDERDRSDSDEDQRPLEQEGKKGSVRDSKGSDQHEKRLFPSLAKLPN
AGEASGSSVEGQRKRKSRGDEEAVTGDDRWNGSGEDERLSYYDSKKSRNSDADVKGKSGG
KLNESDRSNEAGRRKSEKEALLEEHSAREHHQVKGREKEQEAEKSNASKQVFTLKEDGMD
QQYKMAKDRNRDHEKGNDGKHGASLKALSRTKEGKTEDMESDRPRNKSNGTDVDHQHQDE
LHSGERRHRKIKDHSDGKDESQSGSRDRQTMPRDVRTKVAGCYEEQHTDEKAKGDMSRGL
EKRKEEKYKDDRSKAHDRYKNNKYIDDRQKEEERRGDERYKEESSRHEDRHRDGKYREER
SREDRHNKDERYKEKPRNERSDNSSRERHRDDSYRNHRNQDGGSWDVRSSKDNTRDRSLE
KHYKEEHSYSENRYNKNILYENEGNPSVADLRSSKYRDNNKGEKRSYEESALNGDRETHN
AKEYHGDATKRRSEVGSEDLRREYEKFDSRKRDFERKSSTRSSTYPAKEQSRHCTKQEEP
SPGEYGAALGRHRHASDFQSVEDQNKLDANCNELSLPSQNDGSLRSDGRSVHFSERLPSA
SDQQVLIRSNLRHSHDTSDGSMKKGNTRHNDLLLNRQATENYQTASPGHLHPPPDRSEMD
SQIEFDDDNWSQIRERRSSSRSRRSGTVDNARGHGNTWNNPSSWSSPIPNGFGPFHHGPQ
IPGFHPAMHHFHQSLYGIRPSMETNHTGVPYPMHGHPESFSHCAQSFQWHNPAEDPYLSQ
LPGWDASRSVFEEHSHSYDRHELVRNKDPDFQQQSEVPPLSHTSDKPILTQFPGQNRSES
AEVKTVDETNAEKTDAHAPKYRSNSKPVPSSVEVGSRFCSNYFKRLHISTSLASPELYKQ
CVTMTMELEPSASCKATMKRSLKSSKDEHGYQAHGFKHIMQSIFSGKTTSIFEKAMALYS
SSAGSVKSKSPASSSQPESEEVIKGPSVDMVDEGHVTVSEVQALPCTGMSDEVHNNNPAH
HGTDFGMSGDSGLAKDCSNIEEDNVTSDTGDKSFISNHLEGRACYTEEQVPNNGEGGLLP
DAKALQPCCNSVGGITDVPKEQFSGVISDAAFASCPQACEGAIPDCSFNLNRIPCSPGST
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggagcacgcgacgcaggtcccgcaagcacgagcgtgatgagcgggataggtct
gactccgacgaggaccagcggccgctggagcaggagggtaagaagggatccgttagggac
tccaagggctcggatcagcacgagaaacggctgttcccgtcactggcaaagcttccgaat
gcaggcgaggcatctggttcatcggtggaggggcagaggaagaggaagagcagaggggat
gaagaggctgtcactggggatgataggtggaatggcagcggggaagatgagaggcttagc
tactatgattcaaagaagtcgaggaattcagacgctgatgtgaagggaaagtctggaggg
aagcttaatgaatctgataggtccaatgaggctggcagaaggaagtcagagaaagaggca
ttattggaggaacatagtgctcgcgagcatcaccaagtgaaggggagagagaaggagcag
gaggcagagaagtcgaacgcaagcaagcaagtgttcactctgaaggaagatggtatggac
cagcagtataagatggcgaaggataggaatagggatcatgaaaaagggaacgatggcaag
catggtgcatcattgaaagctctatcaagaaccaaagaggggaaaacagaagatatggaa
agtgatcgaccaaggaataagagcaacggaactgatgtggaccatcaacatcaagatgag
ttgcacagtggagagcggaggcacaggaaaataaaggatcactctgatgggaaagatgaa
tcacaaagtggcagcagggacaggcaaaccatgcctagggatgttcgtaccaaagttgct
ggatgttatgaagaacaacacacagatgagaaggccaaaggtgacatgtctagaggtctg
gaaaaacgtaaagaagaaaaatacaaggatgataggtccaaagctcatgatagatataaa
aataataaatacatagatgataggcaaaaagaagaggaaaggcgcggagatgaaaggtat
aaagaggaaagctctcgacatgaagataggcatagggatggaaaatacagagaggaaaga
tcgagagaggacaggcataataaggacgaaagatacaaagagaagcctaggaatgaaaga
tctgataacagctctcgggagagacaccgagatgatagttatagaaatcataggaatcaa
gatggtggatcatgggatgtgcgatcgtcaaaggacaacactagagacaggtctttggaa
aagcactacaaagaagaacatagttactcagagaacagatacaataaaaatatactttat
gaaaatgagggcaacccatctgttgctgatcttaggagctctaagtatagagataataac
aaaggggaaaaaaggtcctatgaagaaagtgctcttaatggtgatagggaaactcacaat
gcaaaagaatatcatggagatgccactaaacgcaggtctgaggtaggtagtgaagatctt
agacgggaatatgagaaatttgattctcggaagagggattttgagagaaagagctccact
agatcgagcacatatcctgccaaggagcaaagcaggcattgcacgaaacaagaagaaccc
tcacccggggaatatggtgctgctcttggaagacatagacatgcatctgactttcagtct
gttgaggatcagaacaaacttgatgccaattgcaatgaattgtctcttccctcacaaaat
gatggaagtttgagatctgatggccgatcagtccattttagtgagagactaccatcagcg
agtgatcagcaagttttgatccggagcaatctgaggcatagtcatgatactagtgatggc
tcaatgaagaaaggtaatactaggcataatgatttattattgaaccgtcaagctaccgag
aattatcaaacagcatcaccagggcatctccacccgccacctgatagatctgagatggat
agccaaatagagtttgatgatgataactggagtcagattagagaacgcagatcaagcagc
cgctctagaagaagcggtactgttgataatgcaagaggacatggtaacacttggaataat
ccttcttcatggtcttcaccaatacctaatggttttggtcctttccaccatgggcctcaa
atccctggttttcacccagctatgcaccacttccatcaatctttatatgggatacggcct
tctatggagacaaatcacaccggggttccttatcctatgcatggacatcctgaaagtttt
tctcattgtgcacaatcatttcagtggcacaatcctgctgaagacccatatctctctcaa
ttgccaggttgggatgcaagcagaagtgtctttgaagaacactcacacagctatgacaga
catgaactagtcaggaataaagatcctgattttcaacagcagtcagaggtgccacctttg
tctcatacttctgacaagcctatattgacgcaattcccaggtcaaaatcgaagtgagagc
gctgaggtcaaaacagttgatgagaccaatgctgaaaaaactgatgcacatgctccaaaa
tatagatctaatagcaagcctgtgccttctagcgtagaagtgggttctcggttttgctct
aactactttaagaggcttcacatttctacaagccttgcttcaccagagttgtacaaacaa
tgtgttacaatgacgatggagttggagccgtctgcatcatgtaaagctaccatgaaacgg
tccttaaagagtagtaaagatgagcacggataccaagcgcatggtttcaaacacattatg
caatccatattttctgggaaaacaacttccatatttgagaaagccatggcgctttatagt
tcaagtgctggttccgtgaaatccaaatcccccgcatcatcttcacaaccagaaagtgaa
gaggtgattaaggggccttctgtggacatggtggatgaaggccatgttactgtcagcgaa
gtgcaggcattgccttgtactggtatgtctgatgaagtgcacaataacaacccggcacat
cacggaactgattttggcatgtcaggtgactctgggttagcaaaagattgcagcaacata
gaagaagacaatgtaacctcagataccggagacaaaagtttcatcagcaaccatcttgag
gggcgtgcttgttatactgaggaacaagttccgaataacggtgagggggggctccttcct
gatgccaaagctctgcaaccttgttgcaactcagtaggcggtattactgacgttcccaaa
gagcaattttctggtgtcatttctgatgctgcttttgcgtcttgtcctcaggcgtgcgaa
ggtgccataccagattgtagttttaatttaaaccggataccttgctctcctgggagcact
taa
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