KEGG   Brachypodium distachyon (stiff brome): 100829040
Entry
100829040         CDS       T01717                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 35B
  KO
K18468  vacuolar protein sorting-associated protein 35
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100829040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bdi04131]
    100829040
Membrane trafficking [BR:bdi04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Retromer subcomplex
    100829040
SSDB
Motif
Pfam: Vps35
Other DBs
NCBI-GeneID: 100829040
NCBI-ProteinID: XP_014752889
UniProt: A0A0Q3RHC3
LinkDB
Position
1:complement(3409824..3418278)
AA seq 793 aa
MLPDGGADDEERWLAEGIAGVQQNAFYMHRAVDSNNLKDALKYSAQMLSELRTSRLTPHK
YYELYMRAFDEMRKLEMFFREETRRGSCSVVDLYELVQHAGNVLPRLYLLCTVGSVYIKS
KEAPAKDVLKDLVEMCRGIQHPLRGLFLRSYLSQISRDKLPDIGSEYEGDAESINDAVEF
VLQNFIEMNKLWVRMQHQGPVREKDKRGKERNELRDLVGKNLHVLSQIEGVDLDMYKENV
LPRISEQVVNCKDDLAQFYLMDCIIQVFPDEYHLQTLETLLSAFPQLQPNVDIKTVLSQL
MDRLSNYAATSPEVLPEFLQVEAFAKFSSAIGKVIEAQVDMPVVGAVTLYVSLLTFTLRV
HPDRLDYVDQVLGACVKKLSGNAKLEDSRATKQIVALLSAPLEKYSNIVTALELSNYPRV
MDYLDNATTKVMALVIIQSIMKNTTCISTSDKIEALFDLIKGLIKDMDGAQDDELDEEDF
KEEQNSVARLIHMLHNDDHEEMLKILCTVQKHILQGGPKRLPFTVPSLVFSALKLVRRLQ
GQDGDVTGEEVPATPKKIFQILHQTIEALSCVPCPELSLRLYLQCAEAANDCDLEPVAYE
FFTQAFILYEEEIADSKAQITALHLIIGTLQRMNIFGVENRDTLTHKTTGYSAKLLKKPD
QCRAVYACSHLFWTDDQDGIMDGERVLLCLKRALRIANAAQQMANVSKGSSGSVTLFIEI
LNKYLYFFEKGIPQITNTVIQDLIELIRTEKQNDSNASDPSAEAFFASTLRYIEFQKQKG
GTIGEKYEQIKAT
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgctgccggacggcggcgcggacgatgaggagcggtggctcgccgagggcatcgccggc
gtccagcagaacgccttctacatgcaccgcgccgtcgactcgaacaacctcaaggacgcg
ctcaagtactcggcgcagatgctctcggagctgcgaacctcgcgcctcaccccgcataag
tactacgagctatatatgagggcgtttgatgagatgcggaagctggagatgtttttcagg
gaggagacccggcgcggcagctgctccgttgttgatctctacgagcttgtgcagcatgct
ggcaacgtactaccgagactctatctcctatgcacagtaggatctgtgtatattaaatca
aaagaggctcccgctaaagatgtgctgaaagaccttgttgaaatgtgtcgaggcattcaa
catcctcttcgtggacttttcctgagaagctacctctctcagataagccgagacaaactg
cctgatattggttccgagtatgaaggggatgctgagagcattaatgatgcagttgaattt
gttcttcaaaacttcatagaaatgaacaaactatgggtccggatgcagcatcaggggcct
gttcgagagaaggacaagcggggaaaggaaagaaatgaactgcgtgatctggtaggcaaa
aaccttcacgttctaagccaaattgagggtgttgaccttgatatgtacaaagaaaatgtt
ctcccaaggatatcggaacaggtggttaactgtaaggacgatcttgctcaattctacctg
atggactgcataatccaagtttttccagacgaataccatttacagacactggaaacattg
ttgagcgcgtttccccagctacagccaaatgttgacatcaaaacggtgctatctcaactc
atggatagattgtcaaactatgctgccacaagtcctgaagtactgccagagtttttgcaa
gttgaagcttttgcaaagttcagcagtgctattggcaaggtgatagaagctcaagttgac
atgcctgttgttggagcagtaactttatatgtatcactcctcacatttactctccgtgtg
catccagatcgacttgattatgttgaccaagtgttgggtgcctgtgtcaaaaaactttct
ggcaacgcaaaacttgaagatagcagagcaacaaagcaaattgtcgcacttcttagtgcc
cccttggagaaatatagtaatattgttactgcattggagctttcaaattatcctagggtt
atggattatctagacaatgctacaacaaaagtgatggctctggtaataattcaaagtata
atgaagaacacaacttgcatatctacttccgacaagattgaggctctttttgatttaatt
aagggacttataaaagacatggatggggctcaagatgatgagcttgatgaggaggatttt
aaggaggaacagaattctgtagcacgccttattcacatgctgcacaatgatgaccatgaa
gagatgctgaagatcttatgtacggtccagaagcatatacttcagggaggtcccaagcgg
ctaccctttactgtgccgtccttagtattctctgctctcaagttggtcagacgattacaa
ggtcaagatggagatgttaccggggaggaagttccagcaactcctaagaaaatatttcag
atcttgcatcagactattgaagcactctcatgtgttccttgtccagaactgtctctcaga
ctatatctacaatgcgcagaggctgccaatgattgtgatttggaaccagttgcatacgag
ttttttactcaagcattcatcttatacgaagaagaaatcgcggattctaaggctcaaatt
actgcgcttcacctaattattggaacccttcagcggatgaatatatttggtgtggaaaat
agagacaccctcactcacaagacaacagggtactcagccaaactcctgaagaagcctgac
caatgccgagcagtgtatgcatgttcacatcttttctggaccgacgaccaagatggaata
atggatggtgaaagggtcctcctctgtttaaagcgtgccctgagaattgcgaatgctgct
caacagatggccaacgtatcaaagggaagcagcggatctgtcactctatttatcgaaatt
ttgaacaagtatctgtacttctttgagaaaggaattccacaaatcacaaacactgtaatc
caagacttgattgaattgattaggacagagaagcaaaatgacagcaatgcatctgatcca
tccgcagaggccttctttgcaagcactctacggtacatcgaattccagaagcagaaaggt
ggaaccataggagaaaaatatgaacaaataaaagctacttga

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