Brachypodium distachyon (stiff brome): 100829061
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Entry
100829061 CDS
T01717
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1B isoform X2
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00270
Cysteine and methionine metabolism
bdi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
100829061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bdi03000
]
100829061
03032 DNA replication proteins [BR:
bdi03032
]
100829061
03036 Chromosome and associated proteins [BR:
bdi03036
]
100829061
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
bdi02048
]
100829061
Enzymes [BR:
bdi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
100829061
Transcription factors [BR:
bdi03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
100829061
DNA replication proteins [BR:
bdi03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
100829061
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
100829061
Prokaryotic defense system [BR:
bdi02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
100829061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNMT1-RFD
DNA_methylase
BAH
XAP5
DUF4611
Motif
Other DBs
NCBI-GeneID:
100829061
NCBI-ProteinID:
XP_010228267
UniProt:
A0A0Q3LBT8
LinkDB
All DBs
Position
1:complement(53901845..53912669)
Genome browser
AA seq
1537 aa
AA seq
DB search
MVKTKSPRSPVTTGTKRCRAKPQKKKEESTGEGQLETEPKDSAEVMHNEVENGAGSAARK
RPRRAAACSDFKEKSVRLSEKSNVVMIKKNRMEEEEIDAINLTKLGPEDSPPCRKLIDFI
LHDADGNLQPFEMSEIDDFFITALIMPVDDDLEKERERGVRCEGFGRIEDWAISGYDEGT
AVVWLSTELADYECVKPASNYRSYYSHFYEKAQVCVEVYRKLMRSVGGNPNLSLEELLAT
VVRSINAIQGYSGTMSKDFVIATGEFVYNQLIGLDQTAGNDDEKLATLPVLLALRDECKS
RVEFNKMPPKISNGSLKINDAECNEVAEDDDEKLARLLQEEEEWKMMKKQRGKRGVPAQK
NVYIKISEAEIANDYPLPAYYKPSTQEMDEYIFDGDDGMFSDDVPVRILNNWVLYNADSR
LISLELIPMKSGTENDIVIFGSGFMRDDDGSCCSTAESANSSSSSSKAEHQDAGVPIYLS
PIKEWLIEFGGSMICITIRTDVAWYKLRQPIKQYAPWCEPVLKTARLAVSIITLLKEQSR
ASKLSFVDVIKKVAEFDKGDPAFISSNISLVERYIVVHGQIILQQFADFPDETIRRSAFA
TGLLMKMEQRRHTKLFMKKKAQVTRGENLNPIATMGTSSKRKAMRATTTRLINRIWSDYY
AHHFPEDSKDGDENEAKEIDDEQEENEDEDAEEEVQIEEEKVSETPPSTRSRKLVSQTSK
EIRWEGKSTGKTASGEALYKCGYARELRIAVGGTVTLEDDSGEIVICFVEYMFQKPDGEK
MVHGRMLQKGSETVLGNAANERELFLTNDCLEFELKDIKELVSVNLQSMPWGHKYRKENS
EADKIERARVEERKKKGLPMEYLCRSLYWPEKGAFFSLPHDKLGLGNGVCSSCEHREPER
DELRILSKTSFIYRKVTYSVHDFLYIRPEFFSQEEDRGTYKAGRNIGLKPYAVCHLLDVC
EPVGSKKINPASAKVSVRRFYRPDDISSDKAYTSDIREVYYSEDIINVPVDMIEGKCDVR
KKIDISNSDLPVMVEHVFFCEHIYDPMTGALKQLPPNVKLTSMVQKAAGALKKNKGKQIC
ENDQVDSDKRKEVPKENRISTLDIFAGCGGLSEGLQQAGASFTKWAIEYEEPAGEAFRQN
HPEAAVFVDNCNVILKAIMDKCGDASDCVSTSEAAEQAAKLAEENIKNLPVPGEVEFING
GPPCQGFSGMNRFNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRL
AVASLLEMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGEILPDWPEPMHVFASPELKIT
LPDGKYYAAAKSTAGGAPFRAITVRDTIGDLPKVENGANKLILEYGGEPTSWFQKKIRGS
TIALNDHISKEMNELNLIRCKHIPKRPGCDWHDLPDEKVKLSSGQMVDLIPWCLPNTAKR
HNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDSYQFA
GTIQSKHRQIGNAVPPPLAFALGRKLKEAVDAKRQQA
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaactaaaagtccacgttctcctgttactacaggaacaaaaaggtgcagagca
aagccacaaaagaaaaaggaggaatcaactggagaaggccaattggagactgagcctaag
gattcagcagaagtgatgcataatgaagttgaaaatggtgctggctctgctgctcggaag
agaccaaggagggcagcagcttgctctgatttcaaagagaaatctgtacgtttatctgaa
aaaagtaatgttgtcatgatcaagaaaaatcggatggaagaggaagaaatagatgcaatc
aacctgacaaaactagggccagaagattcaccgccttgtcggaaattgattgatttcatc
ttgcacgatgcagatgggaatctgcagccctttgaaatgtctgaaatagatgattttttc
ataacagctctcatcatgcccgtggatgatgatctagaaaaagagcgtgaaagaggagta
cgctgtgaaggatttgggcgtattgaggactgggcaatatctggttatgatgaaggtact
gcagtggtctggctctcaacggagcttgctgactatgaatgtgtgaaaccagcaagcaat
tacagatcttattacagccatttttatgagaaggcacaggtgtgtgttgaagtttacaga
aagctcatgagatcagtaggtgggaatcctaacctgagtctggaagaattgcttgctact
gttgttcgttctattaatgctatccaaggttatagtggaacaatgagcaaagactttgtg
attgccactggagaatttgtatacaaccagcttattggattggatcagacagcaggcaat
gatgatgagaagcttgctacactgccagttcttcttgctttaagagatgaatgcaaatcc
agagtggaatttaacaagatgccgcctaagatctcaaatggaagcctgaagatcaatgat
gctgagtgtaatgaggtagctgaggatgatgatgagaaattagcaagattattgcaggaa
gaagaagaatggaagatgatgaagaagcagagaggcaaacgtggagtgcctgcccagaaa
aatgtctacatcaaaattagtgaagctgagattgcaaatgactatcctctgcctgcatac
tataaaccgtctacccaggaaatggatgagtacatatttgatggtgatgatgggatgttc
tccgatgatgtgccagtaagaatcctcaacaactgggttctatacaatgcagattctagg
cttatttctctggaattaatacctatgaagtcaggcacagaaaatgatatagttatcttt
ggatctggctttatgagagatgatgatggcagttgctgttcgacagctgagtctgcaaat
tcatcgtcttcatcaagtaaagctgagcaccaggatgcaggagttccgatatatttgagc
ccaatcaaggaatggcttatagaatttggtggctcaatgatttgcataaccattcgaact
gatgtggcctggtacaagctacgacagccaataaagcagtatgccccttggtgtgagcct
gtactgaaaacagcaaggctagctgttagcattatcaccctattgaaagagcaaagtcgt
gcttcaaagctttcttttgtcgatgtcatcaagaaagtggcagaatttgataaaggggat
cctgcttttatatcatccaacatttcactagttgagagatatattgtggtacatggacag
atcatacttcagcagtttgcagatttcccagatgagactatcagacggagtgcatttgcc
actggtttgttaatgaagatggagcagagaaggcatacaaagttgttcatgaagaaaaaa
gctcaagtcacaaggggagaaaatctcaatccaattgcaacaatgggcacatcatcaaaa
agaaaagcaatgcgtgcaaccacaaccagattgatcaacagaatatggagcgactactat
gcacaccattttcctgaagattccaaggatggagatgaaaatgaagcaaaagaaattgat
gatgagcaagaagaaaatgaagatgaggatgctgaagaggaggtgcagattgaagaagag
aaggtttcagagactccaccatcaacacggtctcgaaaactggtatcccaaactagcaaa
gaaattaggtgggagggtaaatcaactggaaaaacagcttctggagaagctttatacaaa
tgtgggtatgcccgagaactcagaatagctgtgggagggacagtcacactagaagatgat
tcaggagaaatagtcatatgctttgttgaatacatgtttcagaaacctgatggtgaaaaa
atggttcatggaaggatgctacaaaaaggttcagagactgttcttggcaatgctgcaaat
gaaagggagcttttcttaactaatgattgtttagagtttgaattgaaggacatcaaagaa
ttggtgtctgtcaaccttcagtcaatgccttggggtcacaagtatagaaaagagaactct
gaagctgataagattgagcgagctagagtggaagagaggaaaaagaagggtctgccaatg
gaatatttatgcagaagcctgtactggcctgagaagggtgccttcttctccctacctcat
gataaactgggtcttggcaatggtgtttgtagctcttgtgagcatagagaaccagaacgt
gatgaattgagaatactctccaagaccagcttcatctacagaaaagttacctacagtgta
cacgacttcttatacatcaggcctgagttcttctcccaagaagaggatcgtggcacctat
aaggcaggaagaaacattggcctaaaaccctatgcagtttgtcatctgctggatgtctgt
gaacctgttggttctaaaaaaattaaccctgcatcagcaaaagtcagtgtccgaagattt
tatagaccagatgacatttcatcagacaaagcttatacatcagacatcagagaggtatac
tatagcgaagatataattaatgtacctgtggatatgatagagggaaaatgtgatgtcaga
aagaagatagatatctcaaattcagatcttccagtgatggttgaacatgtattcttctgc
gaacatatctatgatcctatgactggagctctcaagcagttgcctccaaatgtaaagctc
acgtccatggtacaaaaggcagctggtgctttgaaaaagaataaagggaaacagatctgt
gaaaatgatcaagttgattcagataagcggaaggaggtgcccaaagagaatcgtatctca
actctggacatttttgctggctgtggaggtttatcagaaggattgcagcaagctggtgca
tccttcacaaaatgggcaattgaatacgaggaaccagctggtgaagcattcaggcaaaac
catccggaagctgctgtatttgtggataactgcaatgtgatcttgaaggcaattatggac
aaatgtggggatgctagtgactgcgtttctacttctgaagctgctgaacaagctgctaaa
cttgctgaagagaatattaagaaccttcctgtccctggtgaagtagaattcataaatggt
ggtcctccctgtcagggcttttctgggatgaacagattcaaccaaagcccatggagtaaa
gttcagtgcgagatgattttagcattcctctcttttgcagaatatttccgtcccagattc
tttcttttagaaaatgttaggaactttgtttctttcaacaaggggcagaccttccgattg
gcagttgcatctctcctggagatgggataccaggttcggtttggaatcttagaagcaggg
acttttggtgttgcgcagtccaggaaaagggcattcatttgggctgctgctccaggagag
attcttcctgactggccagaaccgatgcatgtgtttgctagccctgaactgaaaataaca
ctgcctgatggcaaatactatgcagctgccaaaagcacagctggtggggcgcctttccgt
gcaataactgttagagatacaatcggggatttgccaaaagtggaaaatggtgccaataag
ctcatacttgagtatggaggtgagcccacatcttggttccagaagaagattagaggtagc
acgatcgcactgaatgatcacatatccaaggagatgaatgaactaaatctcataagatgc
aaacacattccaaagcgaccaggctgtgactggcacgacctaccagatgagaaggtgaag
ctatcttctgggcaaatggtggacctgataccttggtgcttgcctaacaccgccaaaagg
cacaaccaatggaaagggctgtacgggaggttggactgggagggcaatttccccacatct
gtgacagatccccagccgatgggtaaggttggcatgtgcttccaccctgaccaggacagg
atcatcacagtccgggaatgtgcaaggtctcagggctttcccgacagctaccaatttgca
ggcaccattcagagcaagcacaggcagatcggcaacgccgtgccgccccctcttgccttc
gctcttgggagaaagctgaaggaagctgttgacgctaagcgacagcaagcgtga
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integrated database retrieval system
