Brachypodium distachyon (stiff brome): 100829300
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Entry
100829300 CDS
T01717
Name
(RefSeq) serine/threonine-protein kinase VPS15 isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
100829300
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bdi01001
]
100829300
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100829300
Enzymes [BR:
bdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
100829300
Protein kinases [BR:
bdi01001
]
Serine/threonine kinases: Other
VPS15 family
100829300
Membrane trafficking [BR:
bdi04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
100829300
Autophagy
Autophagosome formation proteins
PI3K complex
100829300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_C
HEAT
PK_Tyr_Ser-Thr
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
PPP2R1A-like_HEAT
HEAT_2
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
APH
PEP5_VPS11_N
Tti2
Beta-prop_CAF1B_HIR1
Kinase-like
Cohesin_HEAT
NBCH_WD40
Beta-prop_HPS5
TCAD9
DUF7691
Motif
Other DBs
NCBI-GeneID:
100829300
NCBI-ProteinID:
XP_003570301
UniProt:
I1IDH0
LinkDB
All DBs
Position
3:complement(54416761..54425346)
Genome browser
AA seq
1450 aa
AA seq
DB search
MGNKIARTTQASATEYYLHDLPSTYNLVLLDVVSRGRFLKSVLCKHDEGLLLVKVYFKRA
GEPLDLKEHERRLERIRNAFQGLEGSHVWPFQVWFQTDKAAYLLRQYFYSNLHDRLSTRP
FLSQIEKKWLAFQLIHAVEQSHSKGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPDN
DPSDFSFFFDTGGRRRCYLAPERFHEHGGESQVSADAPLQPSMDIFSVGCVLAELFLEGQ
PLFELSQLLAYRRGQYDPLHTLEKIQDADIQDMVLHMIQLDPKERLSCKSYLQKYETVVF
PTYFSRFLHKFFSDIVPLDSDARVEKTQENFERIHDMMISGSTSEHIQVSEKKGIGGQVI
NSPRESSKGTSSVKKNIPRDHRQIVGDLNSLLKEVEQRNNHADSKAMKYTDSYAASNVSR
ANGIEPSPQVNETRIQTARVLAGQNNDVSHVHKISKSNLPALVSTYDVQSDTYSFDIFQQ
IHTKVSCEGMVLLASLLCSCIRSVKKPELRRASLILLKISSTYIDDDSRLQLVIPYVIAM
LSDPAAIVRCAALETLSDVLCLVQDFPISDAMIFPEYILPMLSLLPDDTEESVRVCYASN
IYKLALTAYRFLLHSRSIADTGPLDKSMVAAVSQSAESPAKKQQDKIHRQLARLRRCIYD
IVQELVMGPKQTPNVRRALLQDIGYLCYFFGHRQSNDFLLPILPAFLNDHDEQLRAVYFG
QIVVVCYFIGPRSVEEYLLPYLEQALSDDMEAVVVNVLDCLTMMCGSGYLRKRIIVGLFG
KALPLLCHPIQWVKRSAVRLIAACSESLGPVDTYVYLSPHLRQFLHREPPSISEAALLAC
LKPPVSKSVLYQALEVAKDTGDVVLKGGGKKEQTVHGGRYPATAQSGSLAALEDAARLRS
SNLSSNVSLDIKDSISSDKSLYYGYAQHASAGNSSFYDGLSKGIPSYSVCTDKRGLGEIF
MPWESNRHPGLSTSVQGLQTRENHFSSKHISESMKSSSSVPGDSVSNPETAGTPSFIRSA
VVLETGWKPRGVLVAHLQEHRMSVNDIAVSDDNAFFVTASDDSSIKIWDTRKLEKDIAFR
SRLTYSLGSSRALCTTMLYGSSQVIVGDSDGTLHLFSVDCARGVGSITDRYSGLVNVNRK
DLKEGAILSVINCSSDSFSPTILFSTEHCDIHKWDTRTNSESWSFKSSPEEGYISALVVG
QCGNWFISGSSRGVLTLWDHRFLLPVNSWNYSTVSPIERLCLLIPPQNSISSAGRPLVFV
AAGCNEVSLWNAENGSCHQMFRTASTENEAGMPKTPLRPINKTVTKDVRRAGSYKYRIEE
LADPHPRLPGIRCLLPLPGGDLLTGGTDLKIRYWDQARPEQSFCVAGPSAKGVGNDECYD
IKSSFGVQVVQETCKPPTSASRLTHKTQLAMAAADSAGCHRDAILALASVNLSNQRLISA
SRDGAVKVWK
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atggggaataagatcgcgcggacgacgcaggcgtcggcgacggagtactacctccacgac
ctgccctccacctacaacctcgtgctcctcgacgtcgtcagccgcggccgcttcctcaag
tccgtcctctgcaagcacgacgagggcctgctcctcgtcaaggtctacttcaagcgcgcc
ggcgagcccctcgacctcaaggagcatgagcggaggctggagcggatcaggaacgcgttc
caagggctggagggatcccacgtgtggcccttccaggtgtggtttcaaacggataaggca
gcatatctcctgaggcagtacttctacagcaacctgcatgatagacttagtactcgtcct
ttccttagtcaaattgagaagaaatggcttgcttttcagttaatccatgctgtggagcag
agccatagtaagggagtttgccatggtgacataaaatgtgagaatgtactcgttacctca
tggaactggctataccttgcggactttgcatctttcaaaccaacttacataccggataat
gatccgtctgatttctcattcttcttcgacactggaggaagacgaagatgctatctagca
cctgaaagattccacgagcatggtggtgagtcccaagtttcagcagatgcacctttgcaa
ccatctatggatatattttctgtggggtgtgtgcttgctgaacttttcctggagggtcag
ccgctctttgagctttcacaacttcttgcatataggcgtgggcagtatgaccctctgcat
acccttgaaaagatacaagatgctgatatccaagacatggtacttcacatgattcagtta
gacccaaaagaaaggctatcatgtaaaagctatttgcaaaaatacgaaactgttgttttc
ccgacctatttttcaagatttctgcacaagtttttttcggatattgttccgcttgactca
gatgccagggtcgagaaaacacaggaaaactttgaaaggatacatgacatgatgataagt
ggctcaacaagtgaacacattcaagtatctgaaaagaaaggcattggaggacaagtaata
aactcaccaagggaatcttcaaaaggcacctcttcagttaagaaaaatattcctagagac
catcgacagatagttggagatctcaattcccttctcaaggaagtggagcaaaggaacaac
catgcagattcaaaggccatgaaatacacagacagttatgccgcttcaaatgtttcacgg
gcaaatggtatcgagccgtcgccacaagttaatgaaacacggatccaaactgcaagagtt
ctggcaggccagaacaatgatgtatcccatgtgcacaagatctcaaagagtaacttgcct
gctttagtgtctacttatgatgtccagtcagatacctatagctttgacatttttcaacag
atacataccaaggtgagctgtgaaggcatggtcttgctcgcctcattgctctgctcatgc
ataagaagtgtcaaaaaaccagaactgagaagggctagtcttattcttctgaagatttct
tctacatacatagatgacgatagtcgcttacagctggttattccttatgttattgcaatg
ctttcagatccagctgccatagttcgctgtgctgctttggagaccttgtctgatgttctc
tgtcttgttcaagactttcctatcagcgatgcaatgatattccctgagtacatcctccca
atgctctctttgctcccagatgatacagaggagagtgttagagtttgctatgctagtaac
atttacaagctggctttaacagcttatagattcctgcttcattctcggagcatagctgat
actggccctctagacaaatcaatggtagctgctgtatcacagtctgcagaatcaccagca
aagaagcagcaagataaaatccatcgtcagcttgcacgtctgaggagatgtatttatgac
atagtgcaagagttggtaatgggaccaaagcagacacctaatgtccgcagagctctattg
caagatataggttatctatgttacttttttggacacagacaaagtaatgattttcttctt
cctatacttccagcatttctaaatgaccacgacgagcagctccgtgcagtttactttggt
cagattgtcgttgtttgctactttattggtccaagaagtgtcgaggaatatctcttgccc
tatcttgaacaggcactaagtgatgatatggaggctgtggttgtaaacgtacttgattgc
ttgaccatgatgtgcggaagtggctatttgaggaaaaggataatcgttggcttatttggg
aaggcccttcccctgctatgccatccaatccaatgggttaaacggtcagctgtaaggctt
attgctgcttgtagtgagagcttagggcctgtcgatacttatgtgtacctttctccgcat
ctaaggcagtttctgcacagggagcccccttcaatatctgaagctgctcttcttgcatgc
cttaagcccccagtttcaaaatcagtattatatcaagcgttagaggttgccaaggacaca
ggagatgttgtactgaagggtggtggtaaaaaggaacagacagtacatggtggaagatat
cctgctacagcacaaagtgggtccttggccgctcttgaagatgctgcaaggttgagatcg
tctaatttatccagcaacgtgtctttagacatcaaagattcaatatcttctgataaatcg
ctatattatggctatgcacaacatgcatctgctggcaatagttcattttatgatggcttg
tctaaaggcataccatcatattctgtttgtactgataagcgtggtttaggagaaatattc
atgccctgggaatccaatcggcatccaggtctatcaacttcagttcaaggcctgcagact
agagagaatcatttcagtagcaagcacatcagtgagtcgatgaagagcagctcctccgtg
ccgggtgatagtgtttccaaccctgagactgcaggaacaccctccttcatcagatcagca
gtggttctggagacaggctggaagcctcgtggtgttctagtggcacatctccaggagcat
cgcatgtctgtcaatgatattgccgtctcggacgacaatgccttttttgtgactgcttca
gatgactcaagtatcaagatatgggatacaagaaagttggaaaaagacattgccttcaga
tctaggttaacctacagcctgggtagtagccgagctctgtgtacaacaatgctttatggt
agttcacaggttattgttggcgatagcgatggcacattgcacttgttttctgttgactgt
gcgcgtggtgttgggagcattacggataggtattctggccttgttaatgtgaacaggaag
gatttgaaagaaggtgcaattctcagtgttataaattgttcatcagatagctttagccca
accatccttttcagcactgaacactgtgacatccataagtgggacacgaggaccaattca
gaatcttggtcatttaaatcctcaccagaggagggttatatatcagcacttgtggttggc
cagtgcggaaattggttcatctcagggtcttcaagaggcgttcttacattgtgggaccat
aggtttttgctgcctgttaactcttggaactattcgacagtaagccctatagagagactg
tgcttgcttataccgccacaaaactcaatatcttctgctggcagaccactggtttttgtt
gccgcaggctgcaacgaagtttccctatggaatgctgagaatggaagctgccaccagatg
tttaggacagcgagcacagagaatgaagctggtatgccaaagacaccattaagacctatt
aacaagacagtcaccaaagatgtgaggcgagcaggaagctacaaatacagaattgaggaa
ttggctgatccacatccacgccttccaggcatccgctgcttgcttcctttgcctggggga
gacctattgactggagggacagatttgaagatacgctactgggaccaggccaggcctgag
caaagtttttgcgttgccggtccctcagctaaaggagttggaaatgacgagtgttatgat
ataaaatccagttttggagtacaagttgtccaggaaacgtgcaaaccgcctacgtcggca
tccaggttgacgcacaaaacacagcttgccatggccgccgcggattctgcaggctgccat
cgggatgcgatcctcgcattggcatccgtcaacttgtcaaaccagaggttgatatcggcc
agcagagacggtgccgtcaaagtgtggaaatag
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integrated database retrieval system
