Brachypodium distachyon (stiff brome): 100829320
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Entry
100829320 CDS
T01717
Name
(RefSeq) CLIP-associated protein isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bdi03036
]
100829320
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bdi04812
]
100829320
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
100829320
Cytoskeleton proteins [BR:
bdi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
100829320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
TOR1L1_N
HEAT_2
TTI1
Cnd1
PDS5
UTP20
Sec7-like_HDS
V-ATPase_H_N
Adaptin_N
MMS19_N
INTS1_R4
VHS
SCD
Tra1_ring
Motif
Other DBs
NCBI-GeneID:
100829320
NCBI-ProteinID:
XP_003575363
UniProt:
I1IBL5
LinkDB
All DBs
Position
3:complement(50010725..50024546)
Genome browser
AA seq
1438 aa
AA seq
DB search
MEAALEAARSKDTKERLAGVERLHEALEAAARRGLTAVEVTSLVDTCMDLTKDANFRVAQ
GGLNALSAAAVLAGDHFKIHLNALVPAAVERLGDGKQPVRDASRQLLVTLMEVSSPTIIV
ERAGSYAWSHKSWRVREEFVRTLATAVGLFASTELLLQRVFLSPVLQLLNDSNQSVRDAA
ISCIQEMYKNMGSQFHEELQRHNLPSYMLKEINSRLDKIEPKVPSSDGARMQYKAMERSV
SAHPKRGSPRKKSASRESTLFGADTDITERPVEPIRVHSEKELVREVEKIAAALNPEKDW
SIRIAAMQRIEALVYGGAIDYPSFFMLLKQLVHPLSSQLCDRRSSIVKQACHLLNVLSKE
LLSDFEACAEIFIPALFKLVVITVLVIAESSDNCVKTILRNCKVSRLVPLIADTAKNDRS
AILRARCCEYALLILEYWADAPEVQRSADIYEDLIKCCVADAMSEVRATARSCYRMFIKT
WPERSRRLFMSFDPAIQRIINDEDGGMHKRYPSSLHEKGVQLSRASSHASATHLAGYSTS
SIVAMDKGAAISSESSLSSSILLSQSKAAGRHTERSIESVLSSSKQKVSAIESLLKGVGI
SGRQNFSAVRSTSLDLGVDPPSSRAPSIPLAVPASDHMSLQSSALLDSSLPSITTRRNGG
SRLVDAVPQVDTKERSRSPYLSNLSSERMSGLSMRYMKRSTGRSQDDSITGESNDTWSRP
TRQSPQMHMDKYFTDMPYRDASYRNSQNHNVPHFQRPLRKQVGSRPSASVRHSFDDGHIP
SNDMSGYTDGPASLNDALSEGLSPSSDWVARVAAFNFVQTLLQQGQKGIQEITQSFEKVM
KLFFRYLDDPHHKVAQAAFSTLADVIPACKKPFESYVERILPYVFSRLIDPKELVSKPCF
STLEVVGRTYAIDTLLPAIVRSLDEQRSPKAKLAVLEFANKSFSKYKVDSEGYSNSGFLK
LWLSKLAPLVHEKNAKLKETSIKGIISVYSHFDSAAVLNFILNLSVEEQNLVRRALKQYT
PRIEVDLVNYLQSKKERSRPKSYEQPDLGASSEDGYTLTSRKNYPFGRFSSSSLDNEAEK
RNAVQESTFLNVSIGRTTSDVGTDHADQCFKPTYEPEILTASRESKSNARSVVEAARSWA
DYPEKSDATIDDENSTGTPRQDFCHVLVSDGHNAVASIVGVNNQDIHQFVDLSSVKAASH
TTDNPSIPQLLHLISNDREVSCLEKQDALHQLVKASANNDNSIWPKYFNQILTTVLEVLD
DSDSSLRELSLSLVAEMLHNQKDPMEESVEIVLEKILHVTKDVVAKISNEANQYLNVVLA
KYDPFRCLDVIVPLLVSDDEKTLIMCINCLTKLVGRLSHDELVTQLPSFLPALFDAFSNQ
SPDIRKTVVFCLVDIYIMLGKAFAPYLEGLSSTQLRLVTIYANRISQARSGAPIEANQ
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgctggaggcggcgcgctccaaggacacgaaggagcgtcttgccggagtg
gagcggctacacgaagcgctggaggcggcggcgaggcgtggactgacggcggtggaggtg
acgtcactggttgacacctgcatggatctgaccaaggatgccaacttccgtgtcgcgcag
ggagggctgaacgcgctctccgccgccgcggtgctcgccggcgaccactttaagatccac
ctgaatgctctcgtccctgcggccgtcgagcgcctcggcgatggcaagcagcctgttcgt
gatgcctcccgacagctcctggtcaccctcatggaggtttcttctccaacaatcattgtt
gaaagagctggaagttatgcttggagtcataagagctggagggtgcgagaagaatttgtg
cgcactcttgcaacggcagttgggctttttgcttctacagagctccttctgcagcgagtg
tttctttcacctgtcctgcagttgctgaatgattcaaaccaaagtgttagagatgctgca
atctcatgtattcaggagatgtacaaaaatatgggatctcagttccatgaagagctgcag
cgccataatctgccttcttatatgctaaaggaaataaattcaagattggacaaaatagaa
ccaaaggttccctcatctgatggtgctagaatgcaatataaggccatggaaaggtctgtt
agtgctcatcccaaaagaggcagtccaaggaaaaaaagtgcatcaagggaaagcacatta
tttggagctgatacagatattactgaaaggccagtggaacccataagagttcattcagag
aaagagttagtcagagaggtagaaaagattgcagctgcccttaacccagaaaaggattgg
tctatacgtattgccgcaatgcaaaggattgaagccttggtatatggaggtgcaattgat
tatccatcatttttcatgctcttgaagcagctagttcatccattgtcctcccagctttgt
gatcgacggtctagcattgtaaagcaggcatgtcatctacttaatgtactatcaaaggaa
ctcctcagtgacttcgaagcatgtgcggaaatatttattccggcactttttaagcttgtt
gtcataactgtgcttgtgattgctgaatcttcagacaactgtgtaaaaactatcctgcgg
aattgcaaggtttcacgtcttgttcctcttatagcggacacagcaaagaatgaccgcagt
gcaatcctccgtgctaggtgttgtgaatatgcactactaatcttggaatattgggcagat
gctccagaagtacaacgctcagctgatatatatgaagatctgataaagtgctgtgtggct
gatgcaatgagtgaggttcgtgcaactgcaagaagttgctataggatgttcataaagaca
tggcctgaacgctcacgtcggctttttatgtcatttgatcctgcaatacagaggataata
aatgatgaagatgggggcatgcacaagcggtatccttcatcattgcatgagaagggtgtt
caactttctcgtgcctcgtctcatgcaagtgctacacatttggccggatacagtacttca
tctattgttgcaatggacaagggtgcagcaatttcctccgaatcgtctctctcgtcaagc
attcttctgtcacagtcaaaggcagctggtagacatactgaaagaagcattgaaagtgtg
cttagttcgagcaaacaaaaggtttcagccattgagagtctattgaaaggtgttggcatc
tcaggcaggcaaaatttctcagctgtgcgctcaacaagcttggatcttggagttgatcct
ccatcctctcgtgctccttcaatcccgcttgctgtacctgcttcggatcacatgtctttg
cagagttctgcattgttggattcatctcttcctagcataactaccagaagaaatggcggt
tcgcgtttggtagatgcggtgcctcaggtagataccaaagagcgatcgaggtcaccatat
ttgagtaatctatcatctgaaagaatgtcaggtttgtcaatgcgttatatgaaaagatct
acagggaggtcccaagatgatagcattacgggtgagagtaatgacacgtggtcaaggcca
accagacaatcaccacaaatgcatatggacaaatacttcactgatatgccttatagggat
gccagttatagaaattcacagaaccacaatgttccacacttccagaggcctcttagaaag
caagtgggatcaaggccttctgcgagtgtcagacacagttttgatgatggccacatccca
tctaatgacatgtctggatacacggacggcccagcgtctctaaatgatgcactctctgag
ggtcttagtccaagttcagactgggtggcaagagttgcagcttttaattttgttcagaca
ttgttgcagcaaggacagaagggcattcaggagattactcagagctttgaaaaggtcatg
aagctatttttccgttatttggatgaccctcatcacaaagttgcacaggcagctttctcc
acgcttgcagatgttattccagcatgcaagaagccatttgagagctatgttgaaagaatt
ttgccgtatgtcttttcaagacttattgatccaaaggaattggtttctaagccatgtttc
tcgaccctggaagttgtcggacgaacatatgctatcgacacactgctacctgcaatagta
cgttcgctggatgaacaaaggtctccaaaggctaaactagctgttcttgagtttgctaat
aaatcattcagcaagtacaaggtagactctgagggttacagtaacagcggttttcttaag
ctctggctttcaaaactagcacctttagtacatgaaaagaatgcaaagttgaaggaaaca
tccatcaaaggaatcatatcagtttattctcattttgattcagcggcagtcctaaatttc
attttaaacttgtcagttgaagaacaaaaccttgtgaggcgagctctcaagcaatatact
cctcgcattgaggttgacctggtaaactacctgcaaagcaagaaagaacgttcacgtccc
aagtcttatgaacagcctgatttgggagcttcttctgaagatggttatactctgacatca
aggaagaactatccgtttggacggttttcttcaagttcccttgataatgaagcggagaag
aggaatgcagtgcaagaatcaacatttcttaatgtctccattggccgaacaacctctgat
gttggcactgaccatgctgaccaatgtttcaaacctacctacgaacctgaaattcttaca
gcaagtagggaatcaaagagtaatgctcgctcagttgtagaagctgcacgctcatgggca
gattatcctgaaaaatcagatgccaccatcgatgatgaaaattctactggcacccctcgc
caggatttttgccatgttcttgtttctgatggacataatgctgttgcttcgattgttggg
gtgaacaatcaagacatacaccaatttgtcgaccttagttctgtgaaggctgcctcgcac
acaactgacaaccccagcataccacagcttcttcatctgataagtaatgatagagaagtt
tcatgcttagagaagcaggatgcgctacatcagttggtgaaagcttccgccaacaatgat
aactctatatggccaaagtatttcaatcagattttaacaactgtccttgaggtgttggat
gactctgattcttctctcagggagctttctctatcgctagttgctgagatgctccacaat
cagaaagatcctatggaagaatccgtagagattgtccttgaaaagatactgcatgtcacc
aaagatgttgtggcaaagatttcaaatgaagcaaaccaatacttaaatgttgtgttggca
aaatacgatccttttagatgccttgatgttattgtgcccttgctagtcagtgacgacgag
aagacacttatcatgtgtatcaactgtttgacaaagcttgttgggcggctttcacatgac
gagttggtgactcaactgccttcctttttaccagcactttttgatgctttcagtaaccaa
agtcctgatattcgcaagactgttgtattctgcttggtagatatctacatcatgctaggg
aaagcatttgcaccatacttggaggggctcagtagcacacagttgcggcttgttacaatc
tatgcgaatcgaatatctcaggcaaggtctggtgcaccgatcgaagctaaccaataa
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