Brachypodium distachyon (stiff brome): 100829322
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Entry
100829322 CDS
T01717
Name
(RefSeq) RNA-binding protein 28 isoform X2
KO
K14573
nucleolar protein 4
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100829322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdi03009
]
100829322
Ribosome biogenesis [BR:
bdi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100829322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
Bunya_RdRp
Motif
Other DBs
NCBI-GeneID:
100829322
NCBI-ProteinID:
XP_003557129
UniProt:
I1GM30
LinkDB
All DBs
Position
1:complement(3395132..3403645)
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AA seq
958 aa
AA seq
DB search
MGKGKQRVRGGGGEAATEGDAATGGGSGGHTPSTVFVSNLPYTYKSSDLETVFSEVGPVR
RCFMVASKGSDTSRGFGFVQFATVQDAERAIQQKNGYTVAGRKIRVKLAIQRAPLKERLQ
KKENVQAEDSNPKDDEDDTSTPVKHKETSHNTGPPQPSTKDTKVVKQASIKATDKVKSSE
NQRVAKTVIFGGLHDFSTASEVFRLAGEIGTVVSVNYPLPKEEMELHGLARDGCTPDAAA
VLFASVKSAWDSVVLLHRKEVKGAIVWARQLGGEGSKIRKWRVIVRNLPFKITLKEIMDV
FSSEGFVWDVSIPQKSDDGKSKGFAFVSFTRKQDAENAIKNVNGKVIAKRTVAVDWAVPK
NVYAVAAKSDAKDDELADVSDKGSDDESSEDNLVGGDDSDDGCELDQEISNHLADDDFKS
EADISRKVLENLIKSSEKSEPSDVEGSDIDTDTETENDTSEEKKLHSPEAVKLGESKHVT
EAESTVLSSKPTAVKVAESKHVTEAESTVPALKPKKEDTGLDRTVFISNLPFDISKEEVT
ERFSVFGKVQSFFPVLHKLTKRPIGTGFLKFSTAEAADAAVSAANVAPGLGIFIKSRALN
VKKALDKESAHKKEQEKGKNEIEDRRNLYLSKEGEILPGTPAAEGVSDVDMNKRNWLAKR
KAEMLVSPKFHVSRTRLIIYNLPKTMSINDVKKLCREAVISRATKQNPVIRKVNILKNEK
KGAAQKHSRGVAFVDFQEHEHALVALRVLNNNPGTFGAERRPIVEFALEDVEKMRLQRIR
MERNERAKEAAQDQQRTLGDQSATDGPRSNNRRPFKKGSKRESHDVPSKLSDSGKGPSDG
VSVPGDRDVVESSVEHKRQSQRPAKRARQSNKGSVVWDANQTDAAPNAAESQRPSTKPEQ
ADAPRKRRNRNDGHAEQKRGKATKRARKEPSGEGGVDKSLVEQYRSKFLQHGVSKTEG
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggggaaacagcgcgtccgcggcggaggcggagaagccgccacggaaggcgac
gccgccaccggcggcggttccggagggcacacaccgtccaccgtcttcgtctccaacctg
ccgtacacctacaagtcatccgatctcgagacggtgttcagcgaagtcgggccggtgagg
cgctgcttcatggtcgcgtcgaaagggtccgatacgagtcgaggatttgggtttgtacaa
tttgcaactgttcaagatgctgaacgagctattcagcaaaagaatggttatactgttgct
ggtaggaaaatcagagttaagctcgcaatacaacgtgctccattgaaggaacgtttgcaa
aagaaagagaacgtgcaagctgaagattccaatccaaaagatgatgaagatgatacttct
actcctgtaaaacacaaagaaacctctcataacacaggtccaccacaaccatcgaccaag
gataccaaagtagtgaagcaagctagcattaaggctactgataaagtgaaaagttctgaa
aatcaaagggttgcaaaaactgtcatattcggtggtcttcacgacttttctacagctagt
gaagttttccgtctagctggggagattggcacagtagtatctgtaaattatccccttcct
aaagaggaaatggagctccatgggcttgcacgagatgggtgcacaccggatgcagcagca
gtgctctttgcaagtgtcaaatctgcttgggattctgttgtcctcttgcatcgtaaggag
gtcaaaggagcaattgtttgggctcgtcaacttggcggagagggttcaaagatcaggaaa
tggagagtcatagtcaggaacctgccattcaagattacactaaaggagatcatggacgtg
tttagttcggaaggatttgtctgggatgtgtccattccacaaaagtctgatgatgggaaa
tcgaaaggttttgcctttgtgtcttttacacgcaaacaggatgctgaaaatgctatcaaa
aatgttaacgggaaagttatcgcaaagagaactgtggctgttgattgggctgttccaaaa
aatgtatatgctgttgctgcaaagtctgatgcaaaggatgatgaattggcagatgtatct
gacaagggcagcgatgatgaatcctctgaagataatcttgttggaggagatgatagcgat
gatggctgtgaacttgatcaggagatttccaatcatcttgctgatgatgatttcaaaagc
gaagcagatatttctagaaaagttcttgaaaatttgatcaagtcatcggagaagtctgaa
ccatctgatgttgagggttctgatattgatacagacaccgaaacagaaaatgacacctcc
gaagagaagaaactccattcacctgaagctgtcaagttgggagaatctaaacatgtaaca
gaggcagaaagcactgttctttcttcgaaacctacggctgtcaaggtggcagaatctaaa
catgtaacagaggcagaaagcactgttcctgctttgaaacccaagaaagaagatactggc
ctggataggacagtattcatcagcaaccttccgtttgatattagcaaagaggaggtaaca
gagcggttctcagtattcgggaaggttcaatctttcttccctgttctgcataaactcaca
aagagacctatagggactggttttcttaagttttctacagcagaggcagctgatgcagca
gtttctgctgctaatgttgctcctggattgggaatttttataaaaagtagggcacttaat
gttaagaaagcgctggataaggagtcagctcacaaaaaggaacaggagaagggaaagaat
gagattgaggatcgacgcaacctgtacctatctaaggaaggtgaaatactccctggaacg
ccagctgcagaaggtgtatctgatgttgacatgaataaacgtaattggttagccaaaagg
aaagcagaaatgcttgtatctccaaaatttcacgtctcccgaacaaggcttatcatttac
aatttgccgaagactatgtcaattaatgatgtaaagaagctttgcagagaagcagtaatt
tctcgtgctaccaagcagaatcctgtcatccggaaggtaaatatcctgaaaaatgaaaag
aaaggtgctgcacagaagcattcccgtggtgtagcctttgtggactttcaagagcatgag
catgctcttgtagctcttagggttctaaacaacaaccctggaacttttggtgcagaacgt
cgtccaattgtagaatttgcactcgaagatgttgaaaaaatgaggctccagaggattcga
atggagcgcaatgaaagggcaaaagaggctgcacaagatcagcaaagaactctgggtgac
cagtctgcaactgatggccctcgttcaaataacagaaggcctttcaaaaaaggtagcaag
cgagaatcacatgatgtaccatctaagttgtctgactccggcaaagggccttcagatggc
gtttcagttcctggagatcgtgacgttgtggaaagttcggtggaacacaaaaggcagtct
caaaggcctgcaaaacgagcacggcagtcaaataagggaagtgttgtgtgggatgcaaat
caaacagatgcagcccctaatgctgctgagagtcagaggccttccacaaagcctgagcag
gcagatgcaccgagaaaacggaggaacagaaacgatggccatgcggagcaaaagagagga
aaggctacaaaaagggcaaggaaagagccaagtggggagggaggagtggataaatcgctg
gtggagcagtaccgttccaagttcttgcaacatggcgtcagcaaaaccgaaggatag
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