Brachypodium distachyon (stiff brome): 100829620
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Entry
100829620 CDS
T01717
Name
(RefSeq) elongator complex protein 2 isoform X1
KO
K11374
elongator complex protein 2
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdi03016
]
100829620
Transfer RNA biogenesis [BR:
bdi03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
100829620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_HPS5
Beta-prop_ELP1_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_WDR75_2nd
Beta-prop_EIPR1
WD40_Gbeta
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
100829620
NCBI-ProteinID:
XP_003574691
UniProt:
I1I868
LinkDB
All DBs
Position
3:41294098..41298858
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AA seq
844 aa
AA seq
DB search
MSPADGELAGARGEVVAERVFIGAGCNRVVNNVSWGACGLVAFGAQNAVALFSPSRGEIV
TTLPGHKAAVNCTLWLPSKKDVLQVRGKETHYLLSGSSDGAIMAWKIGSGKREWSHALQL
PTMHKKGVTCLAGRMVSDTVSIFASTSSDGMVVIWEMTVEPTAGGSCNVSCLHSLSVGLK
PMVSLSLAVLTEQGGRLILAMGGLDHKVHIYCGDLSGKFIKACELKGHSDWIRSLDFSLP
VMTGSGKHSLFLVSSSQDKTIRIWKMTSDDVSSGSTLQSRKENIGMASYIEGPLFVVGDT
SCQVSLESLLVGHEDWVYSVEWQPPTLLLGDEAHQPMSILSASMDKMMMIWRPEKNTGLW
INSVTVGELSHSALGFYGGHWEPDGKSILAHGYGGFFHMWRDVGLESENWLPQIVPSGHF
APVSDLTWSRSGEYLLTVSHDQTARIFAPWRSHVNPGDVTCWREIARPQIHGHDINCVAF
IQGTGNHRFVCGADEKVSRVFEATLSFLRTLQEATLLKPNNEDFDDVQVLGANMSALGLS
QKPIYTHGGKESPSSASNDGPDSMETIPDAVPTVFTEPPVEDQLAWNTLWPESHKLYGHG
NELFSICCDQAGKLVASSCKAQSAPVAEIWLWEVGTWKAVGRLQSHNLTVTQMEFSSDNA
FLLSVSRDRHLSVFSIKKTDEGAQHHLVTKHEAHKRIIWACSWNPFGYEFATGSRDKTVK
IWRVQDASSVKLLITLPQFCDSVTALAWTGCDRARNAGIIAVGMDNGLIELWSISGGRSA
SDSSSDPSPLSVACILRFDPLLCHVSTVHRLRWQKHDSSDEKSALELASCGADHCVRVFV
VRDG
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccggcggacggggagctcgccggagctcgcggggaagtggtcgcggagagggta
ttcataggcgccggatgcaaccgcgtggtgaacaacgtctcgtggggcgcgtgcggcctc
gtcgccttcggcgcacagaacgccgtcgccctcttctccccctcgagaggggagatcgtg
acgacgcttcctgggcacaaggcggcggtgaactgcactctgtggctgccgagcaagaag
gatgtactccaagttcgcggcaaggagacacactatctattgtccggaagttctgatggt
gctattatggcatggaagattggttctggtaaaagagagtggtctcatgctttgcaattg
ccaacgatgcataagaaaggagtgacctgtcttgctggaaggatggtgtcggatacggtt
tcaatttttgcttccacctcctcagatggtatggtggttatatgggaaatgacagttgag
cccactgcaggtggcagctgcaatgtgtcatgtttgcattctctttctgttggtttaaaa
ccaatggtttcactttcattagcggtgttgactgaacagggaggccgtctgattttagca
atgggaggtttagatcataaggtccacatttattgtggggatctgtcaggcaagttcatt
aaagcctgtgagcttaagggccattctgattggattagaagtttagacttttctctacca
gtgatgactggcagcggaaagcatagcctttttctcgtaagctcgtctcaggacaaaact
attcggatatggaagatgacgtcagatgatgtttcttctggctccacgcttcagtcaagg
aaggaaaatattgggatggcttcctacattgaaggtcctctatttgtggttggtgataca
agttgccaagtatcgttagagtctcttcttgttgggcatgaggattgggtatattctgta
gagtggcagcctcctacgctcttgcttggtgatgaagctcatcagcctatgagcatatta
tctgcatctatggacaagatgatgatgatatggaggccagagaaaaataccggtctttgg
ataaattcagtgactgttggtgagttaagtcactcggcacttggattttatggtggccat
tgggaacctgatggcaaatctattcttgcacatggctatggtggattttttcatatgtgg
agggatgttggcctggagtccgaaaattggctgcctcagattgtcccatctggtcatttt
gcaccagtttctgacttaacatggtccagatctggcgaatatttgctaacagttagtcat
gaccagacggcacgcatatttgctccttggagaagtcatgtcaacccaggagatgtgacc
tgttggcgtgaaattgctcgtccacaaattcatgggcatgatattaactgtgtggcattc
attcaaggcacagggaaccaccgatttgtttgtggggctgatgaaaaggtctctagagtc
tttgaagctactttatcgttcctgagaacccttcaggaagcaactttgttgaaacccaac
aatgaggattttgatgatgtgcaagtgcttggagcaaatatgtctgctcttgggctttca
cagaaacctatatacacacatgggggaaaggaatccccgagcagtgcttccaatgatggt
cctgattccatggagacgattcctgatgctgtgccaactgtgtttactgagcctcctgtg
gaggaccaactagcatggaataccttatggcctgaatctcacaaactctatgggcatggt
aacgaactattctccatctgctgtgatcaagcagggaagctcgttgcatcatcgtgcaag
gctcaatcagcaccagttgctgagatctggctctgggaggttggaacgtggaaagccgtc
ggccgcttgcagtctcacaatctgacagttacacaaatggagttttcttctgacaatgct
tttcttctgagtgtatcaagggaccgtcacctgtctgtcttttcgattaagaaaactgat
gaaggagcacagcatcatctggttacgaagcatgaagcacacaaaagaattatatgggca
tgctcatggaacccatttggttacgaatttgctactggatcaagggacaagactgtgaag
atatggcgtgttcaagatgcatcttcagtcaagctgctcataacattgccacagttctgt
gacagtgtcacagcactggcctggacaggctgtgatcgtgctcggaatgctggtattatt
gctgtcggcatggataacggactaattgagctctggagtatttcggggggaagaagtgct
tctgacagtagctcagatccatctccactcagcgtcgcatgtattcttcggtttgatcct
ttgttgtgtcatgtgtcaaccgtacaccgtttgcggtggcagaaacacgactcttctgat
gagaaatcagcacttgagctggcttcatgtggagctgatcactgcgtaagggtgtttgtg
gtccgtgatggttga
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